Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28722 | 86389;86390;86391 | chr2:178559968;178559967;178559966 | chr2:179424695;179424694;179424693 |
N2AB | 27081 | 81466;81467;81468 | chr2:178559968;178559967;178559966 | chr2:179424695;179424694;179424693 |
N2A | 26154 | 78685;78686;78687 | chr2:178559968;178559967;178559966 | chr2:179424695;179424694;179424693 |
N2B | 19657 | 59194;59195;59196 | chr2:178559968;178559967;178559966 | chr2:179424695;179424694;179424693 |
Novex-1 | 19782 | 59569;59570;59571 | chr2:178559968;178559967;178559966 | chr2:179424695;179424694;179424693 |
Novex-2 | 19849 | 59770;59771;59772 | chr2:178559968;178559967;178559966 | chr2:179424695;179424694;179424693 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.004 | N | 0.451 | 0.071 | 0.162503812791 | gnomAD-4.0.0 | 1.59135E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85817E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1503 | likely_benign | 0.1499 | benign | -1.872 | Destabilizing | 0.004 | N | 0.379 | neutral | N | 0.511688902 | None | None | N |
V/C | 0.4742 | ambiguous | 0.4779 | ambiguous | -1.278 | Destabilizing | 0.977 | D | 0.658 | neutral | None | None | None | None | N |
V/D | 0.3382 | likely_benign | 0.3176 | benign | -2.385 | Highly Destabilizing | 0.379 | N | 0.684 | prob.neutral | N | 0.501165264 | None | None | N |
V/E | 0.2361 | likely_benign | 0.2111 | benign | -2.138 | Highly Destabilizing | 0.005 | N | 0.591 | neutral | None | None | None | None | N |
V/F | 0.1231 | likely_benign | 0.1322 | benign | -1.042 | Destabilizing | 0.81 | D | 0.674 | neutral | N | 0.488852115 | None | None | N |
V/G | 0.2194 | likely_benign | 0.2151 | benign | -2.402 | Highly Destabilizing | 0.379 | N | 0.669 | neutral | N | 0.478472356 | None | None | N |
V/H | 0.3587 | ambiguous | 0.3551 | ambiguous | -2.262 | Highly Destabilizing | 0.026 | N | 0.639 | neutral | None | None | None | None | N |
V/I | 0.0672 | likely_benign | 0.0697 | benign | -0.377 | Destabilizing | 0.004 | N | 0.451 | neutral | N | 0.486177169 | None | None | N |
V/K | 0.3041 | likely_benign | 0.2753 | benign | -1.256 | Destabilizing | 0.447 | N | 0.643 | neutral | None | None | None | None | N |
V/L | 0.1181 | likely_benign | 0.1206 | benign | -0.377 | Destabilizing | 0.08 | N | 0.641 | neutral | N | 0.456817054 | None | None | N |
V/M | 0.0996 | likely_benign | 0.1048 | benign | -0.601 | Destabilizing | 0.85 | D | 0.667 | neutral | None | None | None | None | N |
V/N | 0.1892 | likely_benign | 0.1902 | benign | -1.657 | Destabilizing | 0.85 | D | 0.699 | prob.neutral | None | None | None | None | N |
V/P | 0.9248 | likely_pathogenic | 0.9259 | pathogenic | -0.852 | Destabilizing | 0.92 | D | 0.659 | neutral | None | None | None | None | N |
V/Q | 0.2267 | likely_benign | 0.2138 | benign | -1.423 | Destabilizing | 0.739 | D | 0.661 | neutral | None | None | None | None | N |
V/R | 0.2507 | likely_benign | 0.2257 | benign | -1.308 | Destabilizing | 0.85 | D | 0.694 | prob.neutral | None | None | None | None | N |
V/S | 0.1419 | likely_benign | 0.1416 | benign | -2.228 | Highly Destabilizing | 0.021 | N | 0.592 | neutral | None | None | None | None | N |
V/T | 0.1251 | likely_benign | 0.1246 | benign | -1.841 | Destabilizing | 0.447 | N | 0.643 | neutral | None | None | None | None | N |
V/W | 0.6454 | likely_pathogenic | 0.6681 | pathogenic | -1.571 | Destabilizing | 0.992 | D | 0.739 | prob.delet. | None | None | None | None | N |
V/Y | 0.3532 | ambiguous | 0.3461 | ambiguous | -1.17 | Destabilizing | 0.85 | D | 0.678 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.