Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28730 | 86413;86414;86415 | chr2:178559944;178559943;178559942 | chr2:179424671;179424670;179424669 |
N2AB | 27089 | 81490;81491;81492 | chr2:178559944;178559943;178559942 | chr2:179424671;179424670;179424669 |
N2A | 26162 | 78709;78710;78711 | chr2:178559944;178559943;178559942 | chr2:179424671;179424670;179424669 |
N2B | 19665 | 59218;59219;59220 | chr2:178559944;178559943;178559942 | chr2:179424671;179424670;179424669 |
Novex-1 | 19790 | 59593;59594;59595 | chr2:178559944;178559943;178559942 | chr2:179424671;179424670;179424669 |
Novex-2 | 19857 | 59794;59795;59796 | chr2:178559944;178559943;178559942 | chr2:179424671;179424670;179424669 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs774912635 | -0.011 | 0.988 | N | 0.558 | 0.473 | 0.393471546983 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
K/T | rs774912635 | -0.011 | 0.988 | N | 0.558 | 0.473 | 0.393471546983 | gnomAD-4.0.0 | 1.59132E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85819E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2987 | likely_benign | 0.2911 | benign | 0.046 | Stabilizing | 0.968 | D | 0.537 | neutral | None | None | None | None | I |
K/C | 0.6542 | likely_pathogenic | 0.6741 | pathogenic | -0.237 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | I |
K/D | 0.5906 | likely_pathogenic | 0.6094 | pathogenic | -0.069 | Destabilizing | 0.991 | D | 0.558 | neutral | None | None | None | None | I |
K/E | 0.2065 | likely_benign | 0.2107 | benign | -0.071 | Destabilizing | 0.919 | D | 0.44 | neutral | N | 0.451197804 | None | None | I |
K/F | 0.8105 | likely_pathogenic | 0.8177 | pathogenic | -0.215 | Destabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | I |
K/G | 0.4678 | ambiguous | 0.4994 | ambiguous | -0.132 | Destabilizing | 0.991 | D | 0.499 | neutral | None | None | None | None | I |
K/H | 0.3321 | likely_benign | 0.3434 | ambiguous | -0.37 | Destabilizing | 0.999 | D | 0.596 | neutral | None | None | None | None | I |
K/I | 0.3316 | likely_benign | 0.3136 | benign | 0.431 | Stabilizing | 0.995 | D | 0.653 | neutral | None | None | None | None | I |
K/L | 0.378 | ambiguous | 0.3609 | ambiguous | 0.431 | Stabilizing | 0.991 | D | 0.499 | neutral | None | None | None | None | I |
K/M | 0.248 | likely_benign | 0.2356 | benign | 0.184 | Stabilizing | 0.998 | D | 0.599 | neutral | N | 0.512459693 | None | None | I |
K/N | 0.4719 | ambiguous | 0.4948 | ambiguous | 0.187 | Stabilizing | 0.988 | D | 0.596 | neutral | D | 0.524271411 | None | None | I |
K/P | 0.7034 | likely_pathogenic | 0.7503 | pathogenic | 0.33 | Stabilizing | 0.995 | D | 0.605 | neutral | None | None | None | None | I |
K/Q | 0.1409 | likely_benign | 0.1408 | benign | 0.015 | Stabilizing | 0.414 | N | 0.344 | neutral | N | 0.49167899 | None | None | I |
K/R | 0.076 | likely_benign | 0.0757 | benign | -0.032 | Destabilizing | 0.919 | D | 0.437 | neutral | N | 0.489158759 | None | None | I |
K/S | 0.3945 | ambiguous | 0.4006 | ambiguous | -0.249 | Destabilizing | 0.968 | D | 0.535 | neutral | None | None | None | None | I |
K/T | 0.1735 | likely_benign | 0.1714 | benign | -0.112 | Destabilizing | 0.988 | D | 0.558 | neutral | N | 0.505165575 | None | None | I |
K/V | 0.2932 | likely_benign | 0.2838 | benign | 0.33 | Stabilizing | 0.991 | D | 0.587 | neutral | None | None | None | None | I |
K/W | 0.7947 | likely_pathogenic | 0.8198 | pathogenic | -0.262 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
K/Y | 0.6873 | likely_pathogenic | 0.6897 | pathogenic | 0.099 | Stabilizing | 0.998 | D | 0.636 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.