Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28739 | 86440;86441;86442 | chr2:178559917;178559916;178559915 | chr2:179424644;179424643;179424642 |
N2AB | 27098 | 81517;81518;81519 | chr2:178559917;178559916;178559915 | chr2:179424644;179424643;179424642 |
N2A | 26171 | 78736;78737;78738 | chr2:178559917;178559916;178559915 | chr2:179424644;179424643;179424642 |
N2B | 19674 | 59245;59246;59247 | chr2:178559917;178559916;178559915 | chr2:179424644;179424643;179424642 |
Novex-1 | 19799 | 59620;59621;59622 | chr2:178559917;178559916;178559915 | chr2:179424644;179424643;179424642 |
Novex-2 | 19866 | 59821;59822;59823 | chr2:178559917;178559916;178559915 | chr2:179424644;179424643;179424642 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | rs1468503993 | -0.636 | 0.047 | N | 0.644 | 0.09 | 0.132336055621 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0667 | likely_benign | 0.0728 | benign | -0.913 | Destabilizing | 0.012 | N | 0.385 | neutral | None | None | None | None | N |
S/C | 0.0756 | likely_benign | 0.0817 | benign | -0.604 | Destabilizing | 0.681 | D | 0.597 | neutral | N | 0.493465714 | None | None | N |
S/D | 0.394 | ambiguous | 0.3641 | ambiguous | -0.633 | Destabilizing | 0.026 | N | 0.388 | neutral | None | None | None | None | N |
S/E | 0.495 | ambiguous | 0.4805 | ambiguous | -0.597 | Destabilizing | None | N | 0.159 | neutral | None | None | None | None | N |
S/F | 0.1534 | likely_benign | 0.1788 | benign | -0.96 | Destabilizing | 0.314 | N | 0.74 | deleterious | None | None | None | None | N |
S/G | 0.0865 | likely_benign | 0.0929 | benign | -1.201 | Destabilizing | 0.02 | N | 0.431 | neutral | N | 0.51807337 | None | None | N |
S/H | 0.341 | ambiguous | 0.3395 | benign | -1.624 | Destabilizing | 0.314 | N | 0.611 | neutral | None | None | None | None | N |
S/I | 0.0788 | likely_benign | 0.0835 | benign | -0.236 | Destabilizing | None | N | 0.555 | neutral | N | 0.43786036 | None | None | N |
S/K | 0.6387 | likely_pathogenic | 0.6253 | pathogenic | -0.788 | Destabilizing | 0.001 | N | 0.233 | neutral | None | None | None | None | N |
S/L | 0.0792 | likely_benign | 0.0844 | benign | -0.236 | Destabilizing | 0.004 | N | 0.643 | neutral | None | None | None | None | N |
S/M | 0.1494 | likely_benign | 0.1633 | benign | 0.07 | Stabilizing | 0.314 | N | 0.628 | neutral | None | None | None | None | N |
S/N | 0.1308 | likely_benign | 0.1376 | benign | -0.861 | Destabilizing | None | N | 0.19 | neutral | N | 0.463662882 | None | None | N |
S/P | 0.1385 | likely_benign | 0.1399 | benign | -0.428 | Destabilizing | 0.209 | N | 0.668 | prob.neutral | None | None | None | None | N |
S/Q | 0.468 | ambiguous | 0.4583 | ambiguous | -0.97 | Destabilizing | 0.116 | N | 0.511 | neutral | None | None | None | None | N |
S/R | 0.5641 | likely_pathogenic | 0.5576 | ambiguous | -0.726 | Destabilizing | 0.047 | N | 0.644 | neutral | N | 0.498871534 | None | None | N |
S/T | 0.0671 | likely_benign | 0.0742 | benign | -0.826 | Destabilizing | None | N | 0.233 | neutral | N | 0.431569106 | None | None | N |
S/V | 0.0916 | likely_benign | 0.0961 | benign | -0.428 | Destabilizing | None | N | 0.564 | neutral | None | None | None | None | N |
S/W | 0.3472 | ambiguous | 0.3782 | ambiguous | -0.948 | Destabilizing | 0.914 | D | 0.733 | deleterious | None | None | None | None | N |
S/Y | 0.1702 | likely_benign | 0.1875 | benign | -0.681 | Destabilizing | 0.482 | N | 0.753 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.