Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28743 | 86452;86453;86454 | chr2:178559905;178559904;178559903 | chr2:179424632;179424631;179424630 |
N2AB | 27102 | 81529;81530;81531 | chr2:178559905;178559904;178559903 | chr2:179424632;179424631;179424630 |
N2A | 26175 | 78748;78749;78750 | chr2:178559905;178559904;178559903 | chr2:179424632;179424631;179424630 |
N2B | 19678 | 59257;59258;59259 | chr2:178559905;178559904;178559903 | chr2:179424632;179424631;179424630 |
Novex-1 | 19803 | 59632;59633;59634 | chr2:178559905;178559904;178559903 | chr2:179424632;179424631;179424630 |
Novex-2 | 19870 | 59833;59834;59835 | chr2:178559905;178559904;178559903 | chr2:179424632;179424631;179424630 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | None | None | 0.651 | N | 0.498 | 0.143 | 0.186928172975 | gnomAD-4.0.0 | 4.79018E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29649E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.228 | likely_benign | 0.234 | benign | -0.714 | Destabilizing | 0.505 | D | 0.501 | neutral | None | None | None | None | N |
Q/C | 0.4721 | ambiguous | 0.5109 | ambiguous | -0.141 | Destabilizing | 0.995 | D | 0.635 | neutral | None | None | None | None | N |
Q/D | 0.7064 | likely_pathogenic | 0.6854 | pathogenic | -1.046 | Destabilizing | 0.712 | D | 0.463 | neutral | None | None | None | None | N |
Q/E | 0.1263 | likely_benign | 0.1139 | benign | -0.824 | Destabilizing | 0.435 | N | 0.488 | neutral | N | 0.466805973 | None | None | N |
Q/F | 0.641 | likely_pathogenic | 0.6481 | pathogenic | -0.14 | Destabilizing | 0.946 | D | 0.606 | neutral | None | None | None | None | N |
Q/G | 0.4249 | ambiguous | 0.4279 | ambiguous | -1.166 | Destabilizing | 0.712 | D | 0.497 | neutral | None | None | None | None | N |
Q/H | 0.2288 | likely_benign | 0.245 | benign | -0.756 | Destabilizing | 0.013 | N | 0.273 | neutral | N | 0.467312952 | None | None | N |
Q/I | 0.3029 | likely_benign | 0.304 | benign | 0.497 | Stabilizing | 0.553 | D | 0.593 | neutral | None | None | None | None | N |
Q/K | 0.1565 | likely_benign | 0.1573 | benign | -0.301 | Destabilizing | 0.651 | D | 0.495 | neutral | N | 0.466298994 | None | None | N |
Q/L | 0.1676 | likely_benign | 0.1716 | benign | 0.497 | Stabilizing | 0.483 | N | 0.512 | neutral | N | 0.500428972 | None | None | N |
Q/M | 0.3742 | ambiguous | 0.3766 | ambiguous | 0.742 | Stabilizing | 0.946 | D | 0.499 | neutral | None | None | None | None | N |
Q/N | 0.4685 | ambiguous | 0.4747 | ambiguous | -1.131 | Destabilizing | 0.712 | D | 0.479 | neutral | None | None | None | None | N |
Q/P | 0.4579 | ambiguous | 0.5045 | ambiguous | 0.124 | Stabilizing | 0.976 | D | 0.543 | neutral | N | 0.467566442 | None | None | N |
Q/R | 0.1535 | likely_benign | 0.1612 | benign | -0.404 | Destabilizing | 0.651 | D | 0.498 | neutral | N | 0.464524567 | None | None | N |
Q/S | 0.3595 | ambiguous | 0.3703 | ambiguous | -1.312 | Destabilizing | 0.712 | D | 0.437 | neutral | None | None | None | None | N |
Q/T | 0.2464 | likely_benign | 0.2587 | benign | -0.875 | Destabilizing | 0.712 | D | 0.474 | neutral | None | None | None | None | N |
Q/V | 0.175 | likely_benign | 0.1773 | benign | 0.124 | Stabilizing | 0.032 | N | 0.416 | neutral | None | None | None | None | N |
Q/W | 0.6057 | likely_pathogenic | 0.624 | pathogenic | -0.09 | Destabilizing | 0.995 | D | 0.611 | neutral | None | None | None | None | N |
Q/Y | 0.4103 | ambiguous | 0.4285 | ambiguous | 0.231 | Stabilizing | 0.897 | D | 0.539 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.