Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28767 | 86524;86525;86526 | chr2:178559833;178559832;178559831 | chr2:179424560;179424559;179424558 |
N2AB | 27126 | 81601;81602;81603 | chr2:178559833;178559832;178559831 | chr2:179424560;179424559;179424558 |
N2A | 26199 | 78820;78821;78822 | chr2:178559833;178559832;178559831 | chr2:179424560;179424559;179424558 |
N2B | 19702 | 59329;59330;59331 | chr2:178559833;178559832;178559831 | chr2:179424560;179424559;179424558 |
Novex-1 | 19827 | 59704;59705;59706 | chr2:178559833;178559832;178559831 | chr2:179424560;179424559;179424558 |
Novex-2 | 19894 | 59905;59906;59907 | chr2:178559833;178559832;178559831 | chr2:179424560;179424559;179424558 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1348921301 | None | 0.958 | N | 0.669 | 0.392 | 0.410071178582 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/E | rs1348921301 | None | 0.958 | N | 0.669 | 0.392 | 0.410071178582 | gnomAD-4.0.0 | 6.57281E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47003E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.686 | likely_pathogenic | 0.692 | pathogenic | -0.011 | Destabilizing | 0.968 | D | 0.677 | prob.neutral | None | None | None | None | N |
K/C | 0.8257 | likely_pathogenic | 0.8426 | pathogenic | -0.358 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
K/D | 0.8878 | likely_pathogenic | 0.8872 | pathogenic | 0.017 | Stabilizing | 0.995 | D | 0.714 | prob.delet. | None | None | None | None | N |
K/E | 0.4392 | ambiguous | 0.4478 | ambiguous | 0.046 | Stabilizing | 0.958 | D | 0.669 | neutral | N | 0.486617836 | None | None | N |
K/F | 0.9249 | likely_pathogenic | 0.9243 | pathogenic | -0.146 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
K/G | 0.787 | likely_pathogenic | 0.7842 | pathogenic | -0.229 | Destabilizing | 0.991 | D | 0.649 | neutral | None | None | None | None | N |
K/H | 0.3953 | ambiguous | 0.3997 | ambiguous | -0.417 | Destabilizing | 0.999 | D | 0.69 | prob.neutral | None | None | None | None | N |
K/I | 0.7569 | likely_pathogenic | 0.7535 | pathogenic | 0.489 | Stabilizing | 0.995 | D | 0.74 | deleterious | None | None | None | None | N |
K/L | 0.6257 | likely_pathogenic | 0.6323 | pathogenic | 0.489 | Stabilizing | 0.991 | D | 0.649 | neutral | None | None | None | None | N |
K/M | 0.5066 | ambiguous | 0.519 | ambiguous | 0.101 | Stabilizing | 0.999 | D | 0.693 | prob.neutral | N | 0.515143798 | None | None | N |
K/N | 0.7533 | likely_pathogenic | 0.7549 | pathogenic | 0.011 | Stabilizing | 0.988 | D | 0.708 | prob.delet. | N | 0.487378304 | None | None | N |
K/P | 0.7201 | likely_pathogenic | 0.7219 | pathogenic | 0.35 | Stabilizing | 0.998 | D | 0.689 | prob.neutral | None | None | None | None | N |
K/Q | 0.212 | likely_benign | 0.2165 | benign | -0.087 | Destabilizing | 0.988 | D | 0.699 | prob.neutral | N | 0.486110857 | None | None | N |
K/R | 0.08 | likely_benign | 0.0772 | benign | -0.127 | Destabilizing | 0.142 | N | 0.397 | neutral | N | 0.447440715 | None | None | N |
K/S | 0.7558 | likely_pathogenic | 0.7628 | pathogenic | -0.444 | Destabilizing | 0.968 | D | 0.692 | prob.neutral | None | None | None | None | N |
K/T | 0.466 | ambiguous | 0.4683 | ambiguous | -0.258 | Destabilizing | 0.988 | D | 0.674 | neutral | D | 0.536406494 | None | None | N |
K/V | 0.6863 | likely_pathogenic | 0.6841 | pathogenic | 0.35 | Stabilizing | 0.995 | D | 0.723 | prob.delet. | None | None | None | None | N |
K/W | 0.8905 | likely_pathogenic | 0.8871 | pathogenic | -0.192 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
K/Y | 0.8257 | likely_pathogenic | 0.8234 | pathogenic | 0.158 | Stabilizing | 0.998 | D | 0.725 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.