Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28786 | 86581;86582;86583 | chr2:178559776;178559775;178559774 | chr2:179424503;179424502;179424501 |
N2AB | 27145 | 81658;81659;81660 | chr2:178559776;178559775;178559774 | chr2:179424503;179424502;179424501 |
N2A | 26218 | 78877;78878;78879 | chr2:178559776;178559775;178559774 | chr2:179424503;179424502;179424501 |
N2B | 19721 | 59386;59387;59388 | chr2:178559776;178559775;178559774 | chr2:179424503;179424502;179424501 |
Novex-1 | 19846 | 59761;59762;59763 | chr2:178559776;178559775;178559774 | chr2:179424503;179424502;179424501 |
Novex-2 | 19913 | 59962;59963;59964 | chr2:178559776;178559775;178559774 | chr2:179424503;179424502;179424501 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.025 | D | 0.318 | 0.501 | 0.664321979793 | gnomAD-4.0.0 | 1.61529E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.89417E-06 | 0 | 0 |
V/I | rs1219680583 | None | 0.773 | N | 0.538 | 0.301 | 0.682044198124 | gnomAD-4.0.0 | 2.06612E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80612E-06 | 0 | 1.66739E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3141 | likely_benign | 0.292 | benign | -1.556 | Destabilizing | 0.025 | N | 0.318 | neutral | D | 0.533921116 | None | None | I |
V/C | 0.7981 | likely_pathogenic | 0.791 | pathogenic | -1.033 | Destabilizing | 0.997 | D | 0.772 | deleterious | None | None | None | None | I |
V/D | 0.9561 | likely_pathogenic | 0.9551 | pathogenic | -1.541 | Destabilizing | 0.983 | D | 0.853 | deleterious | D | 0.613866119 | None | None | I |
V/E | 0.9233 | likely_pathogenic | 0.9277 | pathogenic | -1.436 | Destabilizing | 0.975 | D | 0.833 | deleterious | None | None | None | None | I |
V/F | 0.5199 | ambiguous | 0.495 | ambiguous | -0.976 | Destabilizing | 0.983 | D | 0.765 | deleterious | D | 0.554846295 | None | None | I |
V/G | 0.6061 | likely_pathogenic | 0.5678 | pathogenic | -1.979 | Destabilizing | 0.935 | D | 0.801 | deleterious | D | 0.597614593 | None | None | I |
V/H | 0.9562 | likely_pathogenic | 0.9555 | pathogenic | -1.566 | Destabilizing | 0.999 | D | 0.863 | deleterious | None | None | None | None | I |
V/I | 0.0869 | likely_benign | 0.0865 | benign | -0.449 | Destabilizing | 0.773 | D | 0.538 | neutral | N | 0.506822666 | None | None | I |
V/K | 0.9293 | likely_pathogenic | 0.9314 | pathogenic | -1.335 | Destabilizing | 0.975 | D | 0.833 | deleterious | None | None | None | None | I |
V/L | 0.461 | ambiguous | 0.4375 | ambiguous | -0.449 | Destabilizing | 0.63 | D | 0.605 | neutral | D | 0.555523147 | None | None | I |
V/M | 0.3571 | ambiguous | 0.339 | benign | -0.401 | Destabilizing | 0.996 | D | 0.708 | prob.delet. | None | None | None | None | I |
V/N | 0.8688 | likely_pathogenic | 0.8653 | pathogenic | -1.318 | Destabilizing | 0.987 | D | 0.858 | deleterious | None | None | None | None | I |
V/P | 0.88 | likely_pathogenic | 0.8758 | pathogenic | -0.785 | Destabilizing | 0.987 | D | 0.843 | deleterious | None | None | None | None | I |
V/Q | 0.8951 | likely_pathogenic | 0.8978 | pathogenic | -1.319 | Destabilizing | 0.987 | D | 0.845 | deleterious | None | None | None | None | I |
V/R | 0.8959 | likely_pathogenic | 0.8997 | pathogenic | -1.007 | Destabilizing | 0.987 | D | 0.845 | deleterious | None | None | None | None | I |
V/S | 0.6039 | likely_pathogenic | 0.5728 | pathogenic | -1.893 | Destabilizing | 0.95 | D | 0.81 | deleterious | None | None | None | None | I |
V/T | 0.4755 | ambiguous | 0.451 | ambiguous | -1.655 | Destabilizing | 0.916 | D | 0.61 | neutral | None | None | None | None | I |
V/W | 0.9783 | likely_pathogenic | 0.9768 | pathogenic | -1.314 | Destabilizing | 0.999 | D | 0.837 | deleterious | None | None | None | None | I |
V/Y | 0.904 | likely_pathogenic | 0.8963 | pathogenic | -0.949 | Destabilizing | 0.996 | D | 0.759 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.