Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28792 | 86599;86600;86601 | chr2:178559758;178559757;178559756 | chr2:179424485;179424484;179424483 |
N2AB | 27151 | 81676;81677;81678 | chr2:178559758;178559757;178559756 | chr2:179424485;179424484;179424483 |
N2A | 26224 | 78895;78896;78897 | chr2:178559758;178559757;178559756 | chr2:179424485;179424484;179424483 |
N2B | 19727 | 59404;59405;59406 | chr2:178559758;178559757;178559756 | chr2:179424485;179424484;179424483 |
Novex-1 | 19852 | 59779;59780;59781 | chr2:178559758;178559757;178559756 | chr2:179424485;179424484;179424483 |
Novex-2 | 19919 | 59980;59981;59982 | chr2:178559758;178559757;178559756 | chr2:179424485;179424484;179424483 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | None | None | 1.0 | N | 0.623 | 0.494 | 0.620746667299 | gnomAD-4.0.0 | 2.76378E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 5.27241E-04 | 9.05476E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1723 | likely_benign | 0.1742 | benign | 0.048 | Stabilizing | 1.0 | D | 0.601 | neutral | N | 0.467328362 | None | None | N |
D/C | 0.6096 | likely_pathogenic | 0.5994 | pathogenic | -0.165 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
D/E | 0.1414 | likely_benign | 0.1333 | benign | -0.363 | Destabilizing | 1.0 | D | 0.475 | neutral | N | 0.453944141 | None | None | N |
D/F | 0.5617 | ambiguous | 0.555 | ambiguous | -0.121 | Destabilizing | 1.0 | D | 0.624 | neutral | None | None | None | None | N |
D/G | 0.1139 | likely_benign | 0.1158 | benign | -0.04 | Destabilizing | 1.0 | D | 0.628 | neutral | N | 0.421836823 | None | None | N |
D/H | 0.3196 | likely_benign | 0.3209 | benign | 0.511 | Stabilizing | 1.0 | D | 0.619 | neutral | N | 0.485939596 | None | None | N |
D/I | 0.4006 | ambiguous | 0.3871 | ambiguous | 0.209 | Stabilizing | 1.0 | D | 0.616 | neutral | None | None | None | None | N |
D/K | 0.4221 | ambiguous | 0.4239 | ambiguous | 0.37 | Stabilizing | 1.0 | D | 0.62 | neutral | None | None | None | None | N |
D/L | 0.41 | ambiguous | 0.3946 | ambiguous | 0.209 | Stabilizing | 1.0 | D | 0.62 | neutral | None | None | None | None | N |
D/M | 0.5756 | likely_pathogenic | 0.5598 | ambiguous | -0.009 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | N |
D/N | 0.0933 | likely_benign | 0.0947 | benign | 0.227 | Stabilizing | 1.0 | D | 0.61 | neutral | N | 0.472292647 | None | None | N |
D/P | 0.772 | likely_pathogenic | 0.7728 | pathogenic | 0.173 | Stabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | N |
D/Q | 0.3331 | likely_benign | 0.3285 | benign | 0.207 | Stabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
D/R | 0.4857 | ambiguous | 0.4885 | ambiguous | 0.584 | Stabilizing | 1.0 | D | 0.593 | neutral | None | None | None | None | N |
D/S | 0.1295 | likely_benign | 0.1317 | benign | 0.116 | Stabilizing | 1.0 | D | 0.622 | neutral | None | None | None | None | N |
D/T | 0.2445 | likely_benign | 0.2417 | benign | 0.189 | Stabilizing | 1.0 | D | 0.627 | neutral | None | None | None | None | N |
D/V | 0.2458 | likely_benign | 0.2412 | benign | 0.173 | Stabilizing | 1.0 | D | 0.62 | neutral | N | 0.497802881 | None | None | N |
D/W | 0.8969 | likely_pathogenic | 0.8969 | pathogenic | -0.113 | Destabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | N |
D/Y | 0.2784 | likely_benign | 0.2744 | benign | 0.095 | Stabilizing | 1.0 | D | 0.623 | neutral | N | 0.497549391 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.