Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28800 | 86623;86624;86625 | chr2:178559734;178559733;178559732 | chr2:179424461;179424460;179424459 |
N2AB | 27159 | 81700;81701;81702 | chr2:178559734;178559733;178559732 | chr2:179424461;179424460;179424459 |
N2A | 26232 | 78919;78920;78921 | chr2:178559734;178559733;178559732 | chr2:179424461;179424460;179424459 |
N2B | 19735 | 59428;59429;59430 | chr2:178559734;178559733;178559732 | chr2:179424461;179424460;179424459 |
Novex-1 | 19860 | 59803;59804;59805 | chr2:178559734;178559733;178559732 | chr2:179424461;179424460;179424459 |
Novex-2 | 19927 | 60004;60005;60006 | chr2:178559734;178559733;178559732 | chr2:179424461;179424460;179424459 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/S | None | None | None | N | 0.156 | 0.201 | 0.370240404367 | gnomAD-4.0.0 | 1.38188E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.05581E-07 | 1.19574E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.1331 | likely_benign | 0.1796 | benign | -0.56 | Destabilizing | None | N | 0.157 | neutral | None | None | None | None | N |
Y/C | 0.0629 | likely_benign | 0.0751 | benign | 0.114 | Stabilizing | None | N | 0.249 | neutral | N | 0.449075511 | None | None | N |
Y/D | 0.1166 | likely_benign | 0.1624 | benign | 0.923 | Stabilizing | None | N | 0.212 | neutral | N | 0.379079495 | None | None | N |
Y/E | 0.2859 | likely_benign | 0.379 | ambiguous | 0.902 | Stabilizing | 0.033 | N | 0.291 | neutral | None | None | None | None | N |
Y/F | 0.0615 | likely_benign | 0.0657 | benign | -0.252 | Destabilizing | 0.202 | N | 0.319 | neutral | N | 0.411903989 | None | None | N |
Y/G | 0.1655 | likely_benign | 0.2283 | benign | -0.739 | Destabilizing | None | N | 0.197 | neutral | None | None | None | None | N |
Y/H | 0.0872 | likely_benign | 0.1102 | benign | 0.279 | Stabilizing | 0.47 | N | 0.314 | neutral | N | 0.368017139 | None | None | N |
Y/I | 0.1322 | likely_benign | 0.1726 | benign | -0.118 | Destabilizing | 0.033 | N | 0.282 | neutral | None | None | None | None | N |
Y/K | 0.261 | likely_benign | 0.3528 | ambiguous | 0.23 | Stabilizing | 0.033 | N | 0.275 | neutral | None | None | None | None | N |
Y/L | 0.1858 | likely_benign | 0.235 | benign | -0.118 | Destabilizing | 0.015 | N | 0.235 | neutral | None | None | None | None | N |
Y/M | 0.2444 | likely_benign | 0.295 | benign | -0.051 | Destabilizing | 0.54 | D | 0.263 | neutral | None | None | None | None | N |
Y/N | 0.0631 | likely_benign | 0.0842 | benign | 0.018 | Stabilizing | None | N | 0.178 | neutral | N | 0.347428436 | None | None | N |
Y/P | 0.8058 | likely_pathogenic | 0.8665 | pathogenic | -0.246 | Destabilizing | 0.251 | N | 0.404 | neutral | None | None | None | None | N |
Y/Q | 0.1936 | likely_benign | 0.2562 | benign | 0.076 | Stabilizing | 0.142 | N | 0.376 | neutral | None | None | None | None | N |
Y/R | 0.1694 | likely_benign | 0.235 | benign | 0.446 | Stabilizing | 0.142 | N | 0.395 | neutral | None | None | None | None | N |
Y/S | 0.0561 | likely_benign | 0.0744 | benign | -0.389 | Destabilizing | None | N | 0.156 | neutral | N | 0.35119946 | None | None | N |
Y/T | 0.0964 | likely_benign | 0.1314 | benign | -0.32 | Destabilizing | 0.015 | N | 0.3 | neutral | None | None | None | None | N |
Y/V | 0.111 | likely_benign | 0.1383 | benign | -0.246 | Destabilizing | None | N | 0.158 | neutral | None | None | None | None | N |
Y/W | 0.2692 | likely_benign | 0.3012 | benign | -0.402 | Destabilizing | 0.781 | D | 0.341 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.