Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28811 | 86656;86657;86658 | chr2:178559701;178559700;178559699 | chr2:179424428;179424427;179424426 |
N2AB | 27170 | 81733;81734;81735 | chr2:178559701;178559700;178559699 | chr2:179424428;179424427;179424426 |
N2A | 26243 | 78952;78953;78954 | chr2:178559701;178559700;178559699 | chr2:179424428;179424427;179424426 |
N2B | 19746 | 59461;59462;59463 | chr2:178559701;178559700;178559699 | chr2:179424428;179424427;179424426 |
Novex-1 | 19871 | 59836;59837;59838 | chr2:178559701;178559700;178559699 | chr2:179424428;179424427;179424426 |
Novex-2 | 19938 | 60037;60038;60039 | chr2:178559701;178559700;178559699 | chr2:179424428;179424427;179424426 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs775103234 | -1.037 | 0.775 | N | 0.291 | 0.18 | 0.286081765059 | gnomAD-2.1.1 | 8.24E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.82E-05 | 0 |
T/S | rs775103234 | -1.037 | 0.775 | N | 0.291 | 0.18 | 0.286081765059 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/S | rs775103234 | -1.037 | 0.775 | N | 0.291 | 0.18 | 0.286081765059 | gnomAD-4.0.0 | 1.60637E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.88344E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1071 | likely_benign | 0.1208 | benign | -1.222 | Destabilizing | 0.948 | D | 0.463 | neutral | N | 0.497079223 | None | None | N |
T/C | 0.3103 | likely_benign | 0.3709 | ambiguous | -0.648 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
T/D | 0.5912 | likely_pathogenic | 0.684 | pathogenic | -0.342 | Destabilizing | 0.998 | D | 0.698 | prob.neutral | None | None | None | None | N |
T/E | 0.4226 | ambiguous | 0.5197 | ambiguous | -0.187 | Destabilizing | 0.998 | D | 0.695 | prob.neutral | None | None | None | None | N |
T/F | 0.2409 | likely_benign | 0.3133 | benign | -0.996 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
T/G | 0.3361 | likely_benign | 0.3724 | ambiguous | -1.597 | Destabilizing | 0.992 | D | 0.585 | neutral | None | None | None | None | N |
T/H | 0.2108 | likely_benign | 0.275 | benign | -1.594 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
T/I | 0.1685 | likely_benign | 0.212 | benign | -0.253 | Destabilizing | 0.998 | D | 0.77 | deleterious | N | 0.452041245 | None | None | N |
T/K | 0.2286 | likely_benign | 0.3091 | benign | -0.155 | Destabilizing | 0.998 | D | 0.699 | prob.neutral | None | None | None | None | N |
T/L | 0.1271 | likely_benign | 0.1592 | benign | -0.253 | Destabilizing | 0.996 | D | 0.58 | neutral | None | None | None | None | N |
T/M | 0.0919 | likely_benign | 0.0991 | benign | -0.232 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
T/N | 0.1715 | likely_benign | 0.2093 | benign | -0.541 | Destabilizing | 0.997 | D | 0.627 | neutral | N | 0.491345231 | None | None | N |
T/P | 0.7707 | likely_pathogenic | 0.8023 | pathogenic | -0.546 | Destabilizing | 0.998 | D | 0.77 | deleterious | D | 0.539257585 | None | None | N |
T/Q | 0.209 | likely_benign | 0.2527 | benign | -0.451 | Destabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | N |
T/R | 0.1677 | likely_benign | 0.2338 | benign | -0.294 | Destabilizing | 0.999 | D | 0.774 | deleterious | None | None | None | None | N |
T/S | 0.123 | likely_benign | 0.1332 | benign | -0.975 | Destabilizing | 0.775 | D | 0.291 | neutral | N | 0.49242643 | None | None | N |
T/V | 0.1379 | likely_benign | 0.1615 | benign | -0.546 | Destabilizing | 0.996 | D | 0.503 | neutral | None | None | None | None | N |
T/W | 0.5306 | ambiguous | 0.6274 | pathogenic | -0.934 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
T/Y | 0.2506 | likely_benign | 0.3273 | benign | -0.62 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.