Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2884 | 8875;8876;8877 | chr2:178769931;178769930;178769929 | chr2:179634658;179634657;179634656 |
N2AB | 2884 | 8875;8876;8877 | chr2:178769931;178769930;178769929 | chr2:179634658;179634657;179634656 |
N2A | 2884 | 8875;8876;8877 | chr2:178769931;178769930;178769929 | chr2:179634658;179634657;179634656 |
N2B | 2838 | 8737;8738;8739 | chr2:178769931;178769930;178769929 | chr2:179634658;179634657;179634656 |
Novex-1 | 2838 | 8737;8738;8739 | chr2:178769931;178769930;178769929 | chr2:179634658;179634657;179634656 |
Novex-2 | 2838 | 8737;8738;8739 | chr2:178769931;178769930;178769929 | chr2:179634658;179634657;179634656 |
Novex-3 | 2884 | 8875;8876;8877 | chr2:178769931;178769930;178769929 | chr2:179634658;179634657;179634656 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1390184716 | -1.333 | 0.198 | N | 0.245 | 0.22 | 0.514923749907 | gnomAD-2.1.1 | 3.99E-06 | None | None | None | None | N | None | 0 | 2.89E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/V | rs1390184716 | -1.333 | 0.198 | N | 0.245 | 0.22 | 0.514923749907 | gnomAD-4.0.0 | 2.05224E-06 | None | None | None | None | N | None | 0 | 2.23644E-05 | None | 0 | 0 | None | 0 | 0 | 1.79859E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9335 | likely_pathogenic | 0.9546 | pathogenic | -2.062 | Highly Destabilizing | 0.983 | D | 0.551 | neutral | None | None | None | None | N |
I/C | 0.9369 | likely_pathogenic | 0.9634 | pathogenic | -1.193 | Destabilizing | 1.0 | D | 0.603 | neutral | None | None | None | None | N |
I/D | 0.9956 | likely_pathogenic | 0.9972 | pathogenic | -2.112 | Highly Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | N |
I/E | 0.9899 | likely_pathogenic | 0.9933 | pathogenic | -2.092 | Highly Destabilizing | 0.999 | D | 0.706 | prob.neutral | None | None | None | None | N |
I/F | 0.5127 | ambiguous | 0.6071 | pathogenic | -1.585 | Destabilizing | 0.997 | D | 0.56 | neutral | N | 0.42133328 | None | None | N |
I/G | 0.988 | likely_pathogenic | 0.9928 | pathogenic | -2.419 | Highly Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
I/H | 0.9757 | likely_pathogenic | 0.9857 | pathogenic | -1.771 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
I/K | 0.9525 | likely_pathogenic | 0.9689 | pathogenic | -1.432 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | N |
I/L | 0.3429 | ambiguous | 0.386 | ambiguous | -1.119 | Destabilizing | 0.798 | D | 0.495 | neutral | N | 0.508622859 | None | None | N |
I/M | 0.3405 | ambiguous | 0.411 | ambiguous | -0.743 | Destabilizing | 0.997 | D | 0.558 | neutral | D | 0.604016376 | None | None | N |
I/N | 0.9372 | likely_pathogenic | 0.9504 | pathogenic | -1.284 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | D | 0.647000605 | None | None | N |
I/P | 0.9673 | likely_pathogenic | 0.9707 | pathogenic | -1.406 | Destabilizing | 0.999 | D | 0.728 | prob.delet. | None | None | None | None | N |
I/Q | 0.9728 | likely_pathogenic | 0.9835 | pathogenic | -1.481 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
I/R | 0.9342 | likely_pathogenic | 0.9585 | pathogenic | -0.822 | Destabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | N |
I/S | 0.9503 | likely_pathogenic | 0.9678 | pathogenic | -1.841 | Destabilizing | 0.997 | D | 0.64 | neutral | D | 0.646173809 | None | None | N |
I/T | 0.9115 | likely_pathogenic | 0.9319 | pathogenic | -1.711 | Destabilizing | 0.978 | D | 0.597 | neutral | D | 0.645698441 | None | None | N |
I/V | 0.1048 | likely_benign | 0.1104 | benign | -1.406 | Destabilizing | 0.198 | N | 0.245 | neutral | N | 0.483756352 | None | None | N |
I/W | 0.9809 | likely_pathogenic | 0.9893 | pathogenic | -1.761 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
I/Y | 0.9255 | likely_pathogenic | 0.9537 | pathogenic | -1.533 | Destabilizing | 0.999 | D | 0.572 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.