Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28870 | 86833;86834;86835 | chr2:178559524;178559523;178559522 | chr2:179424251;179424250;179424249 |
N2AB | 27229 | 81910;81911;81912 | chr2:178559524;178559523;178559522 | chr2:179424251;179424250;179424249 |
N2A | 26302 | 79129;79130;79131 | chr2:178559524;178559523;178559522 | chr2:179424251;179424250;179424249 |
N2B | 19805 | 59638;59639;59640 | chr2:178559524;178559523;178559522 | chr2:179424251;179424250;179424249 |
Novex-1 | 19930 | 60013;60014;60015 | chr2:178559524;178559523;178559522 | chr2:179424251;179424250;179424249 |
Novex-2 | 19997 | 60214;60215;60216 | chr2:178559524;178559523;178559522 | chr2:179424251;179424250;179424249 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.939 | N | 0.571 | 0.347 | 0.434384183301 | gnomAD-4.0.0 | 2.7369E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.598E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1441 | likely_benign | 0.1395 | benign | -0.012 | Destabilizing | 0.939 | D | 0.571 | neutral | N | 0.481077994 | None | None | I |
E/C | 0.7968 | likely_pathogenic | 0.7898 | pathogenic | -0.041 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | I |
E/D | 0.1184 | likely_benign | 0.1107 | benign | -0.177 | Destabilizing | 0.02 | N | 0.216 | neutral | N | 0.467226049 | None | None | I |
E/F | 0.7294 | likely_pathogenic | 0.7205 | pathogenic | -0.073 | Destabilizing | 0.999 | D | 0.66 | neutral | None | None | None | None | I |
E/G | 0.1563 | likely_benign | 0.1531 | benign | -0.14 | Destabilizing | 0.939 | D | 0.471 | neutral | N | 0.47984863 | None | None | I |
E/H | 0.4778 | ambiguous | 0.4507 | ambiguous | 0.425 | Stabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | I |
E/I | 0.2723 | likely_benign | 0.2676 | benign | 0.269 | Stabilizing | 0.993 | D | 0.676 | prob.neutral | None | None | None | None | I |
E/K | 0.1407 | likely_benign | 0.1304 | benign | 0.471 | Stabilizing | 0.939 | D | 0.587 | neutral | N | 0.456680982 | None | None | I |
E/L | 0.3219 | likely_benign | 0.3138 | benign | 0.269 | Stabilizing | 0.993 | D | 0.671 | neutral | None | None | None | None | I |
E/M | 0.4191 | ambiguous | 0.4065 | ambiguous | 0.106 | Stabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | I |
E/N | 0.2482 | likely_benign | 0.2341 | benign | 0.32 | Stabilizing | 0.973 | D | 0.589 | neutral | None | None | None | None | I |
E/P | 0.5174 | ambiguous | 0.5205 | ambiguous | 0.194 | Stabilizing | 0.993 | D | 0.617 | neutral | None | None | None | None | I |
E/Q | 0.1415 | likely_benign | 0.1333 | benign | 0.322 | Stabilizing | 0.991 | D | 0.581 | neutral | N | 0.508958028 | None | None | I |
E/R | 0.259 | likely_benign | 0.247 | benign | 0.669 | Stabilizing | 0.993 | D | 0.658 | neutral | None | None | None | None | I |
E/S | 0.1906 | likely_benign | 0.18 | benign | 0.144 | Stabilizing | 0.953 | D | 0.588 | neutral | None | None | None | None | I |
E/T | 0.2162 | likely_benign | 0.2037 | benign | 0.251 | Stabilizing | 0.993 | D | 0.543 | neutral | None | None | None | None | I |
E/V | 0.1658 | likely_benign | 0.1668 | benign | 0.194 | Stabilizing | 0.991 | D | 0.622 | neutral | N | 0.487486678 | None | None | I |
E/W | 0.8791 | likely_pathogenic | 0.87 | pathogenic | -0.029 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | I |
E/Y | 0.6145 | likely_pathogenic | 0.5883 | pathogenic | 0.155 | Stabilizing | 0.999 | D | 0.622 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.