Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28878 | 86857;86858;86859 | chr2:178559500;178559499;178559498 | chr2:179424227;179424226;179424225 |
N2AB | 27237 | 81934;81935;81936 | chr2:178559500;178559499;178559498 | chr2:179424227;179424226;179424225 |
N2A | 26310 | 79153;79154;79155 | chr2:178559500;178559499;178559498 | chr2:179424227;179424226;179424225 |
N2B | 19813 | 59662;59663;59664 | chr2:178559500;178559499;178559498 | chr2:179424227;179424226;179424225 |
Novex-1 | 19938 | 60037;60038;60039 | chr2:178559500;178559499;178559498 | chr2:179424227;179424226;179424225 |
Novex-2 | 20005 | 60238;60239;60240 | chr2:178559500;178559499;178559498 | chr2:179424227;179424226;179424225 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.006 | N | 0.306 | 0.065 | 0.190952846119 | gnomAD-4.0.0 | 1.59138E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41313E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6643 | likely_pathogenic | 0.6474 | pathogenic | -0.206 | Destabilizing | 0.735 | D | 0.571 | neutral | None | None | None | None | I |
K/C | 0.7831 | likely_pathogenic | 0.7707 | pathogenic | -0.164 | Destabilizing | 0.998 | D | 0.777 | deleterious | None | None | None | None | I |
K/D | 0.9012 | likely_pathogenic | 0.8897 | pathogenic | -0.149 | Destabilizing | 0.951 | D | 0.602 | neutral | None | None | None | None | I |
K/E | 0.4711 | ambiguous | 0.4451 | ambiguous | -0.094 | Destabilizing | 0.557 | D | 0.554 | neutral | N | 0.456680982 | None | None | I |
K/F | 0.9051 | likely_pathogenic | 0.8986 | pathogenic | -0.061 | Destabilizing | 0.94 | D | 0.75 | deleterious | None | None | None | None | I |
K/G | 0.7328 | likely_pathogenic | 0.7222 | pathogenic | -0.517 | Destabilizing | 0.847 | D | 0.577 | neutral | None | None | None | None | I |
K/H | 0.4678 | ambiguous | 0.4541 | ambiguous | -0.937 | Destabilizing | 0.995 | D | 0.637 | neutral | None | None | None | None | I |
K/I | 0.5346 | ambiguous | 0.5104 | ambiguous | 0.571 | Stabilizing | 0.364 | N | 0.749 | deleterious | None | None | None | None | I |
K/L | 0.5593 | ambiguous | 0.5352 | ambiguous | 0.571 | Stabilizing | 0.075 | N | 0.571 | neutral | None | None | None | None | I |
K/M | 0.4083 | ambiguous | 0.3859 | ambiguous | 0.454 | Stabilizing | 0.976 | D | 0.633 | neutral | N | 0.510227465 | None | None | I |
K/N | 0.695 | likely_pathogenic | 0.6816 | pathogenic | -0.082 | Destabilizing | 0.936 | D | 0.577 | neutral | N | 0.493641859 | None | None | I |
K/P | 0.9666 | likely_pathogenic | 0.9632 | pathogenic | 0.342 | Stabilizing | 0.975 | D | 0.661 | neutral | None | None | None | None | I |
K/Q | 0.2281 | likely_benign | 0.2213 | benign | -0.221 | Destabilizing | 0.64 | D | 0.583 | neutral | N | 0.457297057 | None | None | I |
K/R | 0.1022 | likely_benign | 0.0988 | benign | -0.453 | Destabilizing | 0.006 | N | 0.306 | neutral | N | 0.466897975 | None | None | I |
K/S | 0.6999 | likely_pathogenic | 0.6902 | pathogenic | -0.591 | Destabilizing | 0.735 | D | 0.555 | neutral | None | None | None | None | I |
K/T | 0.3047 | likely_benign | 0.2957 | benign | -0.362 | Destabilizing | 0.009 | N | 0.351 | neutral | N | 0.405865372 | None | None | I |
K/V | 0.5299 | ambiguous | 0.5029 | ambiguous | 0.342 | Stabilizing | 0.274 | N | 0.575 | neutral | None | None | None | None | I |
K/W | 0.869 | likely_pathogenic | 0.855 | pathogenic | -0.004 | Destabilizing | 0.999 | D | 0.794 | deleterious | None | None | None | None | I |
K/Y | 0.8112 | likely_pathogenic | 0.7919 | pathogenic | 0.287 | Stabilizing | 0.848 | D | 0.735 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.