Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28887 | 86884;86885;86886 | chr2:178559473;178559472;178559471 | chr2:179424200;179424199;179424198 |
N2AB | 27246 | 81961;81962;81963 | chr2:178559473;178559472;178559471 | chr2:179424200;179424199;179424198 |
N2A | 26319 | 79180;79181;79182 | chr2:178559473;178559472;178559471 | chr2:179424200;179424199;179424198 |
N2B | 19822 | 59689;59690;59691 | chr2:178559473;178559472;178559471 | chr2:179424200;179424199;179424198 |
Novex-1 | 19947 | 60064;60065;60066 | chr2:178559473;178559472;178559471 | chr2:179424200;179424199;179424198 |
Novex-2 | 20014 | 60265;60266;60267 | chr2:178559473;178559472;178559471 | chr2:179424200;179424199;179424198 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs1377533598 | None | 0.928 | N | 0.709 | 0.222 | 0.18274738541 | gnomAD-4.0.0 | 2.73696E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59805E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.834 | likely_pathogenic | 0.8389 | pathogenic | -0.616 | Destabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | N |
A/D | 0.8841 | likely_pathogenic | 0.8718 | pathogenic | -0.604 | Destabilizing | 0.996 | D | 0.713 | prob.delet. | N | 0.492487066 | None | None | N |
A/E | 0.8282 | likely_pathogenic | 0.8129 | pathogenic | -0.624 | Destabilizing | 0.992 | D | 0.738 | prob.delet. | None | None | None | None | N |
A/F | 0.7019 | likely_pathogenic | 0.6986 | pathogenic | -0.674 | Destabilizing | 0.983 | D | 0.729 | prob.delet. | None | None | None | None | N |
A/G | 0.2984 | likely_benign | 0.3067 | benign | -0.878 | Destabilizing | 0.963 | D | 0.646 | neutral | N | 0.484099656 | None | None | N |
A/H | 0.914 | likely_pathogenic | 0.9078 | pathogenic | -0.9 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | N |
A/I | 0.5377 | ambiguous | 0.5592 | ambiguous | -0.112 | Destabilizing | 0.745 | D | 0.653 | neutral | None | None | None | None | N |
A/K | 0.9402 | likely_pathogenic | 0.9298 | pathogenic | -0.891 | Destabilizing | 0.992 | D | 0.739 | prob.delet. | None | None | None | None | N |
A/L | 0.4986 | ambiguous | 0.5133 | ambiguous | -0.112 | Destabilizing | 0.895 | D | 0.572 | neutral | None | None | None | None | N |
A/M | 0.4885 | ambiguous | 0.5035 | ambiguous | -0.188 | Destabilizing | 0.996 | D | 0.712 | prob.delet. | None | None | None | None | N |
A/N | 0.7008 | likely_pathogenic | 0.709 | pathogenic | -0.647 | Destabilizing | 0.997 | D | 0.726 | prob.delet. | None | None | None | None | N |
A/P | 0.851 | likely_pathogenic | 0.8476 | pathogenic | -0.243 | Destabilizing | 0.996 | D | 0.736 | prob.delet. | N | 0.477731044 | None | None | N |
A/Q | 0.8062 | likely_pathogenic | 0.8 | pathogenic | -0.765 | Destabilizing | 0.997 | D | 0.737 | prob.delet. | None | None | None | None | N |
A/R | 0.9206 | likely_pathogenic | 0.9011 | pathogenic | -0.569 | Destabilizing | 0.992 | D | 0.744 | deleterious | None | None | None | None | N |
A/S | 0.1607 | likely_benign | 0.1742 | benign | -1.022 | Destabilizing | 0.928 | D | 0.635 | neutral | N | 0.440596808 | None | None | N |
A/T | 0.2484 | likely_benign | 0.2587 | benign | -0.942 | Destabilizing | 0.928 | D | 0.709 | prob.delet. | N | 0.455603546 | None | None | N |
A/V | 0.2962 | likely_benign | 0.3127 | benign | -0.243 | Destabilizing | 0.085 | N | 0.364 | neutral | N | 0.436671069 | None | None | N |
A/W | 0.9636 | likely_pathogenic | 0.9566 | pathogenic | -1.02 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | N |
A/Y | 0.8401 | likely_pathogenic | 0.8311 | pathogenic | -0.588 | Destabilizing | 0.992 | D | 0.723 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.