Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28889 | 86890;86891;86892 | chr2:178559467;178559466;178559465 | chr2:179424194;179424193;179424192 |
N2AB | 27248 | 81967;81968;81969 | chr2:178559467;178559466;178559465 | chr2:179424194;179424193;179424192 |
N2A | 26321 | 79186;79187;79188 | chr2:178559467;178559466;178559465 | chr2:179424194;179424193;179424192 |
N2B | 19824 | 59695;59696;59697 | chr2:178559467;178559466;178559465 | chr2:179424194;179424193;179424192 |
Novex-1 | 19949 | 60070;60071;60072 | chr2:178559467;178559466;178559465 | chr2:179424194;179424193;179424192 |
Novex-2 | 20016 | 60271;60272;60273 | chr2:178559467;178559466;178559465 | chr2:179424194;179424193;179424192 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | None | None | 0.967 | N | 0.425 | 0.33 | 0.327419511103 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9227 | likely_pathogenic | 0.8605 | pathogenic | -0.117 | Destabilizing | 0.916 | D | 0.368 | neutral | None | None | None | None | N |
K/C | 0.9267 | likely_pathogenic | 0.8866 | pathogenic | -0.33 | Destabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | N |
K/D | 0.9859 | likely_pathogenic | 0.9752 | pathogenic | 0.07 | Stabilizing | 0.987 | D | 0.454 | neutral | None | None | None | None | N |
K/E | 0.8673 | likely_pathogenic | 0.7606 | pathogenic | 0.094 | Stabilizing | 0.892 | D | 0.346 | neutral | N | 0.460470648 | None | None | N |
K/F | 0.9857 | likely_pathogenic | 0.9712 | pathogenic | -0.176 | Destabilizing | 0.999 | D | 0.576 | neutral | None | None | None | None | N |
K/G | 0.8953 | likely_pathogenic | 0.8311 | pathogenic | -0.357 | Destabilizing | 0.975 | D | 0.403 | neutral | None | None | None | None | N |
K/H | 0.7152 | likely_pathogenic | 0.6484 | pathogenic | -0.603 | Destabilizing | 0.997 | D | 0.457 | neutral | None | None | None | None | N |
K/I | 0.9555 | likely_pathogenic | 0.9121 | pathogenic | 0.448 | Stabilizing | 0.987 | D | 0.581 | neutral | None | None | None | None | N |
K/L | 0.8544 | likely_pathogenic | 0.7634 | pathogenic | 0.448 | Stabilizing | 0.975 | D | 0.403 | neutral | None | None | None | None | N |
K/M | 0.7783 | likely_pathogenic | 0.638 | pathogenic | 0.236 | Stabilizing | 0.999 | D | 0.46 | neutral | N | 0.511459616 | None | None | N |
K/N | 0.9565 | likely_pathogenic | 0.9275 | pathogenic | 0.046 | Stabilizing | 0.967 | D | 0.44 | neutral | N | 0.468226127 | None | None | N |
K/P | 0.9877 | likely_pathogenic | 0.9811 | pathogenic | 0.289 | Stabilizing | 0.996 | D | 0.418 | neutral | None | None | None | None | N |
K/Q | 0.4312 | ambiguous | 0.3244 | benign | -0.132 | Destabilizing | 0.967 | D | 0.455 | neutral | N | 0.489582834 | None | None | N |
K/R | 0.0819 | likely_benign | 0.0787 | benign | -0.178 | Destabilizing | 0.025 | N | 0.27 | neutral | N | 0.405542872 | None | None | N |
K/S | 0.9408 | likely_pathogenic | 0.8957 | pathogenic | -0.502 | Destabilizing | 0.916 | D | 0.368 | neutral | None | None | None | None | N |
K/T | 0.8649 | likely_pathogenic | 0.76 | pathogenic | -0.317 | Destabilizing | 0.967 | D | 0.425 | neutral | N | 0.442039603 | None | None | N |
K/V | 0.9064 | likely_pathogenic | 0.8354 | pathogenic | 0.289 | Stabilizing | 0.987 | D | 0.476 | neutral | None | None | None | None | N |
K/W | 0.9631 | likely_pathogenic | 0.9335 | pathogenic | -0.127 | Destabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | N |
K/Y | 0.954 | likely_pathogenic | 0.9209 | pathogenic | 0.195 | Stabilizing | 0.996 | D | 0.504 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.