Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28907 | 86944;86945;86946 | chr2:178559413;178559412;178559411 | chr2:179424140;179424139;179424138 |
N2AB | 27266 | 82021;82022;82023 | chr2:178559413;178559412;178559411 | chr2:179424140;179424139;179424138 |
N2A | 26339 | 79240;79241;79242 | chr2:178559413;178559412;178559411 | chr2:179424140;179424139;179424138 |
N2B | 19842 | 59749;59750;59751 | chr2:178559413;178559412;178559411 | chr2:179424140;179424139;179424138 |
Novex-1 | 19967 | 60124;60125;60126 | chr2:178559413;178559412;178559411 | chr2:179424140;179424139;179424138 |
Novex-2 | 20034 | 60325;60326;60327 | chr2:178559413;178559412;178559411 | chr2:179424140;179424139;179424138 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.031 | N | 0.311 | 0.222 | 0.314716216878 | gnomAD-4.0.0 | 5.47407E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19638E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0647 | likely_benign | 0.0618 | benign | -0.693 | Destabilizing | 0.174 | N | 0.468 | neutral | N | 0.47910792 | None | None | N |
T/C | 0.2252 | likely_benign | 0.2329 | benign | -0.432 | Destabilizing | 0.973 | D | 0.667 | neutral | None | None | None | None | N |
T/D | 0.2511 | likely_benign | 0.2401 | benign | 0.239 | Stabilizing | 0.826 | D | 0.635 | neutral | None | None | None | None | N |
T/E | 0.2296 | likely_benign | 0.2202 | benign | 0.215 | Stabilizing | 0.704 | D | 0.63 | neutral | None | None | None | None | N |
T/F | 0.1777 | likely_benign | 0.1789 | benign | -0.93 | Destabilizing | 0.906 | D | 0.744 | deleterious | None | None | None | None | N |
T/G | 0.1139 | likely_benign | 0.1122 | benign | -0.905 | Destabilizing | 0.404 | N | 0.65 | neutral | None | None | None | None | N |
T/H | 0.1828 | likely_benign | 0.1856 | benign | -1.09 | Destabilizing | 0.973 | D | 0.731 | prob.delet. | None | None | None | None | N |
T/I | 0.1193 | likely_benign | 0.1107 | benign | -0.236 | Destabilizing | 0.031 | N | 0.311 | neutral | N | 0.480375368 | None | None | N |
T/K | 0.1795 | likely_benign | 0.1886 | benign | -0.505 | Destabilizing | 0.704 | D | 0.625 | neutral | None | None | None | None | N |
T/L | 0.0742 | likely_benign | 0.074 | benign | -0.236 | Destabilizing | 0.218 | N | 0.496 | neutral | None | None | None | None | N |
T/M | 0.0801 | likely_benign | 0.0794 | benign | -0.045 | Destabilizing | 0.218 | N | 0.431 | neutral | None | None | None | None | N |
T/N | 0.0799 | likely_benign | 0.0776 | benign | -0.386 | Destabilizing | 0.642 | D | 0.528 | neutral | N | 0.469206419 | None | None | N |
T/P | 0.0677 | likely_benign | 0.0705 | benign | -0.357 | Destabilizing | 0.879 | D | 0.685 | prob.neutral | N | 0.51224905 | None | None | N |
T/Q | 0.164 | likely_benign | 0.1675 | benign | -0.549 | Destabilizing | 0.826 | D | 0.689 | prob.neutral | None | None | None | None | N |
T/R | 0.173 | likely_benign | 0.1842 | benign | -0.246 | Destabilizing | 0.826 | D | 0.687 | prob.neutral | None | None | None | None | N |
T/S | 0.0735 | likely_benign | 0.0717 | benign | -0.708 | Destabilizing | 0.003 | N | 0.329 | neutral | N | 0.46247359 | None | None | N |
T/V | 0.0986 | likely_benign | 0.0949 | benign | -0.357 | Destabilizing | 0.218 | N | 0.496 | neutral | None | None | None | None | N |
T/W | 0.4396 | ambiguous | 0.4466 | ambiguous | -0.862 | Destabilizing | 0.991 | D | 0.758 | deleterious | None | None | None | None | N |
T/Y | 0.2067 | likely_benign | 0.2104 | benign | -0.616 | Destabilizing | 0.906 | D | 0.753 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.