Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28915 | 86968;86969;86970 | chr2:178559389;178559388;178559387 | chr2:179424116;179424115;179424114 |
N2AB | 27274 | 82045;82046;82047 | chr2:178559389;178559388;178559387 | chr2:179424116;179424115;179424114 |
N2A | 26347 | 79264;79265;79266 | chr2:178559389;178559388;178559387 | chr2:179424116;179424115;179424114 |
N2B | 19850 | 59773;59774;59775 | chr2:178559389;178559388;178559387 | chr2:179424116;179424115;179424114 |
Novex-1 | 19975 | 60148;60149;60150 | chr2:178559389;178559388;178559387 | chr2:179424116;179424115;179424114 |
Novex-2 | 20042 | 60349;60350;60351 | chr2:178559389;178559388;178559387 | chr2:179424116;179424115;179424114 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs764006835 | -1.253 | 1.0 | D | 0.845 | 0.823 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Y/C | rs764006835 | -1.253 | 1.0 | D | 0.845 | 0.823 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/C | rs764006835 | -1.253 | 1.0 | D | 0.845 | 0.823 | None | gnomAD-4.0.0 | 6.57065E-06 | None | None | None | None | N | None | 2.4122E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9766 | likely_pathogenic | 0.981 | pathogenic | -2.97 | Highly Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
Y/C | 0.6155 | likely_pathogenic | 0.6634 | pathogenic | -1.607 | Destabilizing | 1.0 | D | 0.845 | deleterious | D | 0.663184979 | None | None | N |
Y/D | 0.9896 | likely_pathogenic | 0.9909 | pathogenic | -3.515 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | D | 0.663184979 | None | None | N |
Y/E | 0.9969 | likely_pathogenic | 0.9974 | pathogenic | -3.298 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
Y/F | 0.152 | likely_benign | 0.1716 | benign | -1.066 | Destabilizing | 0.999 | D | 0.771 | deleterious | D | 0.607970871 | None | None | N |
Y/G | 0.9662 | likely_pathogenic | 0.9707 | pathogenic | -3.387 | Highly Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
Y/H | 0.843 | likely_pathogenic | 0.8699 | pathogenic | -2.081 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | D | 0.663184979 | None | None | N |
Y/I | 0.9223 | likely_pathogenic | 0.9405 | pathogenic | -1.576 | Destabilizing | 0.999 | D | 0.855 | deleterious | None | None | None | None | N |
Y/K | 0.9969 | likely_pathogenic | 0.9977 | pathogenic | -2.292 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
Y/L | 0.8817 | likely_pathogenic | 0.9067 | pathogenic | -1.576 | Destabilizing | 0.997 | D | 0.812 | deleterious | None | None | None | None | N |
Y/M | 0.9656 | likely_pathogenic | 0.9733 | pathogenic | -1.255 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
Y/N | 0.8965 | likely_pathogenic | 0.9168 | pathogenic | -3.162 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | D | 0.662983175 | None | None | N |
Y/P | 0.9963 | likely_pathogenic | 0.9968 | pathogenic | -2.057 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
Y/Q | 0.9882 | likely_pathogenic | 0.9909 | pathogenic | -2.869 | Highly Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
Y/R | 0.9833 | likely_pathogenic | 0.9866 | pathogenic | -2.126 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
Y/S | 0.8818 | likely_pathogenic | 0.8975 | pathogenic | -3.444 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | D | 0.663184979 | None | None | N |
Y/T | 0.967 | likely_pathogenic | 0.973 | pathogenic | -3.106 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
Y/V | 0.8689 | likely_pathogenic | 0.8926 | pathogenic | -2.057 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
Y/W | 0.7079 | likely_pathogenic | 0.7024 | pathogenic | -0.397 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.