Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2892 | 8899;8900;8901 | chr2:178769907;178769906;178769905 | chr2:179634634;179634633;179634632 |
N2AB | 2892 | 8899;8900;8901 | chr2:178769907;178769906;178769905 | chr2:179634634;179634633;179634632 |
N2A | 2892 | 8899;8900;8901 | chr2:178769907;178769906;178769905 | chr2:179634634;179634633;179634632 |
N2B | 2846 | 8761;8762;8763 | chr2:178769907;178769906;178769905 | chr2:179634634;179634633;179634632 |
Novex-1 | 2846 | 8761;8762;8763 | chr2:178769907;178769906;178769905 | chr2:179634634;179634633;179634632 |
Novex-2 | 2846 | 8761;8762;8763 | chr2:178769907;178769906;178769905 | chr2:179634634;179634633;179634632 |
Novex-3 | 2892 | 8899;8900;8901 | chr2:178769907;178769906;178769905 | chr2:179634634;179634633;179634632 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs763393324 | 0.367 | 0.742 | N | 0.575 | 0.122 | 0.345175991111 | gnomAD-2.1.1 | 1.2E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.65E-05 | 0 |
E/K | rs763393324 | 0.367 | 0.742 | N | 0.575 | 0.122 | 0.345175991111 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs763393324 | 0.367 | 0.742 | N | 0.575 | 0.122 | 0.345175991111 | gnomAD-4.0.0 | 1.30129E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69493E-05 | 0 | 1.60041E-05 |
E/Q | rs763393324 | -0.045 | 0.008 | N | 0.228 | 0.107 | 0.252681307341 | gnomAD-2.1.1 | 3.99E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.63559E-04 |
E/Q | rs763393324 | -0.045 | 0.008 | N | 0.228 | 0.107 | 0.252681307341 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs763393324 | -0.045 | 0.008 | N | 0.228 | 0.107 | 0.252681307341 | gnomAD-4.0.0 | 1.23933E-06 | None | None | None | None | N | None | 1.33601E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.47463E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1429 | likely_benign | 0.1375 | benign | -0.437 | Destabilizing | 0.338 | N | 0.544 | neutral | N | 0.512344528 | None | None | N |
E/C | 0.7777 | likely_pathogenic | 0.8134 | pathogenic | -0.213 | Destabilizing | 0.991 | D | 0.682 | prob.neutral | None | None | None | None | N |
E/D | 0.2023 | likely_benign | 0.1904 | benign | -0.481 | Destabilizing | 0.505 | D | 0.552 | neutral | D | 0.53678514 | None | None | N |
E/F | 0.7385 | likely_pathogenic | 0.7381 | pathogenic | -0.147 | Destabilizing | 0.967 | D | 0.614 | neutral | None | None | None | None | N |
E/G | 0.2961 | likely_benign | 0.3115 | benign | -0.67 | Destabilizing | 0.505 | D | 0.497 | neutral | D | 0.587372217 | None | None | N |
E/H | 0.3634 | ambiguous | 0.3847 | ambiguous | 0.092 | Stabilizing | 0.826 | D | 0.52 | neutral | None | None | None | None | N |
E/I | 0.2783 | likely_benign | 0.2576 | benign | 0.155 | Stabilizing | 0.906 | D | 0.621 | neutral | None | None | None | None | N |
E/K | 0.1184 | likely_benign | 0.1299 | benign | 0.205 | Stabilizing | 0.742 | D | 0.575 | neutral | N | 0.508308856 | None | None | N |
E/L | 0.3535 | ambiguous | 0.3236 | benign | 0.155 | Stabilizing | 0.826 | D | 0.525 | neutral | None | None | None | None | N |
E/M | 0.3601 | ambiguous | 0.351 | ambiguous | 0.183 | Stabilizing | 0.973 | D | 0.566 | neutral | None | None | None | None | N |
E/N | 0.2751 | likely_benign | 0.2487 | benign | -0.257 | Destabilizing | 0.826 | D | 0.518 | neutral | None | None | None | None | N |
E/P | 0.8074 | likely_pathogenic | 0.8248 | pathogenic | -0.021 | Destabilizing | 0.906 | D | 0.535 | neutral | None | None | None | None | N |
E/Q | 0.1126 | likely_benign | 0.1085 | benign | -0.193 | Destabilizing | 0.008 | N | 0.228 | neutral | N | 0.514709059 | None | None | N |
E/R | 0.2075 | likely_benign | 0.2449 | benign | 0.494 | Stabilizing | 0.704 | D | 0.515 | neutral | None | None | None | None | N |
E/S | 0.1854 | likely_benign | 0.1758 | benign | -0.41 | Destabilizing | 0.05 | N | 0.273 | neutral | None | None | None | None | N |
E/T | 0.1457 | likely_benign | 0.135 | benign | -0.215 | Destabilizing | 0.404 | N | 0.519 | neutral | None | None | None | None | N |
E/V | 0.1556 | likely_benign | 0.1442 | benign | -0.021 | Destabilizing | 0.782 | D | 0.491 | neutral | N | 0.492117271 | None | None | N |
E/W | 0.9011 | likely_pathogenic | 0.9178 | pathogenic | 0.054 | Stabilizing | 0.991 | D | 0.695 | prob.neutral | None | None | None | None | N |
E/Y | 0.6333 | likely_pathogenic | 0.6536 | pathogenic | 0.106 | Stabilizing | 0.906 | D | 0.581 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.