Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28924 | 86995;86996;86997 | chr2:178559362;178559361;178559360 | chr2:179424089;179424088;179424087 |
N2AB | 27283 | 82072;82073;82074 | chr2:178559362;178559361;178559360 | chr2:179424089;179424088;179424087 |
N2A | 26356 | 79291;79292;79293 | chr2:178559362;178559361;178559360 | chr2:179424089;179424088;179424087 |
N2B | 19859 | 59800;59801;59802 | chr2:178559362;178559361;178559360 | chr2:179424089;179424088;179424087 |
Novex-1 | 19984 | 60175;60176;60177 | chr2:178559362;178559361;178559360 | chr2:179424089;179424088;179424087 |
Novex-2 | 20051 | 60376;60377;60378 | chr2:178559362;178559361;178559360 | chr2:179424089;179424088;179424087 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.941 | N | 0.376 | 0.222 | 0.166414681773 | gnomAD-4.0.0 | 6.84865E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.0014E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3094 | likely_benign | 0.3271 | benign | -0.549 | Destabilizing | 0.992 | D | 0.58 | neutral | N | 0.479499126 | None | None | I |
E/C | 0.9462 | likely_pathogenic | 0.9501 | pathogenic | -0.334 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
E/D | 0.2507 | likely_benign | 0.2306 | benign | -0.495 | Destabilizing | 0.941 | D | 0.376 | neutral | N | 0.490428196 | None | None | I |
E/F | 0.9566 | likely_pathogenic | 0.9522 | pathogenic | -0.136 | Destabilizing | 1.0 | D | 0.619 | neutral | None | None | None | None | I |
E/G | 0.5707 | likely_pathogenic | 0.5654 | pathogenic | -0.785 | Destabilizing | 0.999 | D | 0.564 | neutral | N | 0.515454352 | None | None | I |
E/H | 0.8209 | likely_pathogenic | 0.8126 | pathogenic | 0.229 | Stabilizing | 1.0 | D | 0.621 | neutral | None | None | None | None | I |
E/I | 0.528 | ambiguous | 0.5174 | ambiguous | 0.059 | Stabilizing | 0.998 | D | 0.635 | neutral | None | None | None | None | I |
E/K | 0.4309 | ambiguous | 0.3961 | ambiguous | 0.175 | Stabilizing | 0.996 | D | 0.565 | neutral | N | 0.452813957 | None | None | I |
E/L | 0.7561 | likely_pathogenic | 0.7467 | pathogenic | 0.059 | Stabilizing | 0.998 | D | 0.612 | neutral | None | None | None | None | I |
E/M | 0.7179 | likely_pathogenic | 0.6979 | pathogenic | 0.072 | Stabilizing | 0.997 | D | 0.608 | neutral | None | None | None | None | I |
E/N | 0.5552 | ambiguous | 0.5307 | ambiguous | -0.403 | Destabilizing | 0.996 | D | 0.667 | neutral | None | None | None | None | I |
E/P | 0.8391 | likely_pathogenic | 0.8201 | pathogenic | -0.124 | Destabilizing | 0.987 | D | 0.605 | neutral | None | None | None | None | I |
E/Q | 0.2989 | likely_benign | 0.2866 | benign | -0.32 | Destabilizing | 0.998 | D | 0.554 | neutral | N | 0.501375908 | None | None | I |
E/R | 0.5942 | likely_pathogenic | 0.5785 | pathogenic | 0.544 | Stabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | I |
E/S | 0.4524 | ambiguous | 0.4437 | ambiguous | -0.544 | Destabilizing | 0.994 | D | 0.607 | neutral | None | None | None | None | I |
E/T | 0.4743 | ambiguous | 0.4554 | ambiguous | -0.335 | Destabilizing | 0.999 | D | 0.618 | neutral | None | None | None | None | I |
E/V | 0.3925 | ambiguous | 0.3842 | ambiguous | -0.124 | Destabilizing | 0.996 | D | 0.607 | neutral | N | 0.503069419 | None | None | I |
E/W | 0.9904 | likely_pathogenic | 0.9894 | pathogenic | 0.125 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
E/Y | 0.8755 | likely_pathogenic | 0.8774 | pathogenic | 0.134 | Stabilizing | 1.0 | D | 0.612 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.