Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28967 | 87124;87125;87126 | chr2:178558560;178558559;178558558 | chr2:179423287;179423286;179423285 |
N2AB | 27326 | 82201;82202;82203 | chr2:178558560;178558559;178558558 | chr2:179423287;179423286;179423285 |
N2A | 26399 | 79420;79421;79422 | chr2:178558560;178558559;178558558 | chr2:179423287;179423286;179423285 |
N2B | 19902 | 59929;59930;59931 | chr2:178558560;178558559;178558558 | chr2:179423287;179423286;179423285 |
Novex-1 | 20027 | 60304;60305;60306 | chr2:178558560;178558559;178558558 | chr2:179423287;179423286;179423285 |
Novex-2 | 20094 | 60505;60506;60507 | chr2:178558560;178558559;178558558 | chr2:179423287;179423286;179423285 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.812 | N | 0.586 | 0.297 | 0.314716216878 | gnomAD-4.0.0 | 3.1828E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.8659E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.147 | likely_benign | 0.1444 | benign | -0.19 | Destabilizing | 0.7 | D | 0.569 | neutral | N | 0.468687487 | None | None | I |
E/C | 0.8367 | likely_pathogenic | 0.8528 | pathogenic | -0.161 | Destabilizing | 0.996 | D | 0.738 | prob.delet. | None | None | None | None | I |
E/D | 0.133 | likely_benign | 0.1599 | benign | -0.23 | Destabilizing | None | N | 0.223 | neutral | N | 0.446216059 | None | None | I |
E/F | 0.7268 | likely_pathogenic | 0.7651 | pathogenic | -0.186 | Destabilizing | 0.998 | D | 0.673 | neutral | None | None | None | None | I |
E/G | 0.1824 | likely_benign | 0.1997 | benign | -0.332 | Destabilizing | 0.886 | D | 0.47 | neutral | N | 0.512979768 | None | None | I |
E/H | 0.4992 | ambiguous | 0.5409 | ambiguous | 0.296 | Stabilizing | 0.997 | D | 0.647 | neutral | None | None | None | None | I |
E/I | 0.2803 | likely_benign | 0.3025 | benign | 0.132 | Stabilizing | 0.95 | D | 0.69 | prob.neutral | None | None | None | None | I |
E/K | 0.1598 | likely_benign | 0.1667 | benign | 0.314 | Stabilizing | 0.812 | D | 0.586 | neutral | N | 0.441327527 | None | None | I |
E/L | 0.3153 | likely_benign | 0.3314 | benign | 0.132 | Stabilizing | 0.95 | D | 0.68 | prob.neutral | None | None | None | None | I |
E/M | 0.422 | ambiguous | 0.4324 | ambiguous | 0.014 | Stabilizing | 0.975 | D | 0.643 | neutral | None | None | None | None | I |
E/N | 0.2799 | likely_benign | 0.324 | benign | 0.122 | Stabilizing | 0.686 | D | 0.581 | neutral | None | None | None | None | I |
E/P | 0.5155 | ambiguous | 0.5311 | ambiguous | 0.043 | Stabilizing | 0.739 | D | 0.615 | neutral | None | None | None | None | I |
E/Q | 0.1448 | likely_benign | 0.1486 | benign | 0.131 | Stabilizing | 0.957 | D | 0.577 | neutral | N | 0.495490086 | None | None | I |
E/R | 0.2773 | likely_benign | 0.2922 | benign | 0.558 | Stabilizing | 0.976 | D | 0.653 | neutral | None | None | None | None | I |
E/S | 0.1977 | likely_benign | 0.2157 | benign | -0.056 | Destabilizing | 0.756 | D | 0.587 | neutral | None | None | None | None | I |
E/T | 0.2281 | likely_benign | 0.2407 | benign | 0.06 | Stabilizing | 0.968 | D | 0.537 | neutral | None | None | None | None | I |
E/V | 0.1786 | likely_benign | 0.1922 | benign | 0.043 | Stabilizing | 0.911 | D | 0.627 | neutral | N | 0.504186927 | None | None | I |
E/W | 0.8939 | likely_pathogenic | 0.9157 | pathogenic | -0.102 | Destabilizing | 0.999 | D | 0.742 | deleterious | None | None | None | None | I |
E/Y | 0.6409 | likely_pathogenic | 0.6932 | pathogenic | 0.04 | Stabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.