Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28968 | 87127;87128;87129 | chr2:178558557;178558556;178558555 | chr2:179423284;179423283;179423282 |
N2AB | 27327 | 82204;82205;82206 | chr2:178558557;178558556;178558555 | chr2:179423284;179423283;179423282 |
N2A | 26400 | 79423;79424;79425 | chr2:178558557;178558556;178558555 | chr2:179423284;179423283;179423282 |
N2B | 19903 | 59932;59933;59934 | chr2:178558557;178558556;178558555 | chr2:179423284;179423283;179423282 |
Novex-1 | 20028 | 60307;60308;60309 | chr2:178558557;178558556;178558555 | chr2:179423284;179423283;179423282 |
Novex-2 | 20095 | 60508;60509;60510 | chr2:178558557;178558556;178558555 | chr2:179423284;179423283;179423282 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/P | rs754679595 | None | 0.998 | N | 0.583 | 0.465 | 0.372993862945 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/P | rs754679595 | None | 0.998 | N | 0.583 | 0.465 | 0.372993862945 | gnomAD-4.0.0 | 1.23938E-06 | None | None | None | None | I | None | 2.66873E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/R | rs754679595 | 0.075 | 0.967 | N | 0.451 | 0.287 | 0.340273420219 | gnomAD-2.1.1 | 1.07E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.35E-05 | 0 |
H/R | rs754679595 | 0.075 | 0.967 | N | 0.451 | 0.287 | 0.340273420219 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
H/R | rs754679595 | 0.075 | 0.967 | N | 0.451 | 0.287 | 0.340273420219 | gnomAD-4.0.0 | 8.67563E-06 | None | None | None | None | I | None | 1.33437E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.10187E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.6378 | likely_pathogenic | 0.6381 | pathogenic | 0.214 | Stabilizing | 0.99 | D | 0.537 | neutral | None | None | None | None | I |
H/C | 0.3938 | ambiguous | 0.3574 | ambiguous | 0.542 | Stabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | I |
H/D | 0.4674 | ambiguous | 0.5067 | ambiguous | 0.149 | Stabilizing | 0.957 | D | 0.519 | neutral | N | 0.423968343 | None | None | I |
H/E | 0.6137 | likely_pathogenic | 0.6517 | pathogenic | 0.144 | Stabilizing | 0.894 | D | 0.478 | neutral | None | None | None | None | I |
H/F | 0.3441 | ambiguous | 0.3463 | ambiguous | 0.54 | Stabilizing | 0.999 | D | 0.481 | neutral | None | None | None | None | I |
H/G | 0.6174 | likely_pathogenic | 0.5953 | pathogenic | -0.015 | Destabilizing | 0.995 | D | 0.543 | neutral | None | None | None | None | I |
H/I | 0.5532 | ambiguous | 0.6365 | pathogenic | 0.772 | Stabilizing | 0.999 | D | 0.619 | neutral | None | None | None | None | I |
H/K | 0.5343 | ambiguous | 0.5473 | ambiguous | 0.202 | Stabilizing | 0.951 | D | 0.503 | neutral | None | None | None | None | I |
H/L | 0.3047 | likely_benign | 0.3687 | ambiguous | 0.772 | Stabilizing | 0.984 | D | 0.534 | neutral | N | 0.504218638 | None | None | I |
H/M | 0.6417 | likely_pathogenic | 0.6753 | pathogenic | 0.663 | Stabilizing | 1.0 | D | 0.585 | neutral | None | None | None | None | I |
H/N | 0.1791 | likely_benign | 0.1988 | benign | 0.3 | Stabilizing | 0.978 | D | 0.468 | neutral | N | 0.452501739 | None | None | I |
H/P | 0.8421 | likely_pathogenic | 0.8694 | pathogenic | 0.611 | Stabilizing | 0.998 | D | 0.583 | neutral | N | 0.502295841 | None | None | I |
H/Q | 0.4141 | ambiguous | 0.4074 | ambiguous | 0.315 | Stabilizing | 0.545 | D | 0.143 | neutral | N | 0.465604322 | None | None | I |
H/R | 0.2782 | likely_benign | 0.2807 | benign | -0.135 | Destabilizing | 0.967 | D | 0.451 | neutral | N | 0.478168188 | None | None | I |
H/S | 0.4618 | ambiguous | 0.439 | ambiguous | 0.27 | Stabilizing | 0.99 | D | 0.496 | neutral | None | None | None | None | I |
H/T | 0.5029 | ambiguous | 0.5355 | ambiguous | 0.357 | Stabilizing | 0.995 | D | 0.481 | neutral | None | None | None | None | I |
H/V | 0.5036 | ambiguous | 0.5594 | ambiguous | 0.611 | Stabilizing | 0.997 | D | 0.55 | neutral | None | None | None | None | I |
H/W | 0.5018 | ambiguous | 0.4983 | ambiguous | 0.478 | Stabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
H/Y | 0.1327 | likely_benign | 0.1289 | benign | 0.85 | Stabilizing | 0.996 | D | 0.438 | neutral | N | 0.433801335 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.