Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28975 | 87148;87149;87150 | chr2:178558536;178558535;178558534 | chr2:179423263;179423262;179423261 |
N2AB | 27334 | 82225;82226;82227 | chr2:178558536;178558535;178558534 | chr2:179423263;179423262;179423261 |
N2A | 26407 | 79444;79445;79446 | chr2:178558536;178558535;178558534 | chr2:179423263;179423262;179423261 |
N2B | 19910 | 59953;59954;59955 | chr2:178558536;178558535;178558534 | chr2:179423263;179423262;179423261 |
Novex-1 | 20035 | 60328;60329;60330 | chr2:178558536;178558535;178558534 | chr2:179423263;179423262;179423261 |
Novex-2 | 20102 | 60529;60530;60531 | chr2:178558536;178558535;178558534 | chr2:179423263;179423262;179423261 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | None | N | 0.098 | 0.094 | 0.326345978581 | gnomAD-4.0.0 | 1.59137E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43283E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1043 | likely_benign | 0.1119 | benign | -1.215 | Destabilizing | 0.005 | N | 0.237 | neutral | N | 0.462761592 | None | None | I |
V/C | 0.4892 | ambiguous | 0.5128 | ambiguous | -0.578 | Destabilizing | 0.628 | D | 0.373 | neutral | None | None | None | None | I |
V/D | 0.25 | likely_benign | 0.3066 | benign | -1.285 | Destabilizing | 0.038 | N | 0.373 | neutral | None | None | None | None | I |
V/E | 0.1848 | likely_benign | 0.2509 | benign | -1.346 | Destabilizing | None | N | 0.197 | neutral | N | 0.440596808 | None | None | I |
V/F | 0.1093 | likely_benign | 0.1164 | benign | -1.1 | Destabilizing | 0.038 | N | 0.405 | neutral | None | None | None | None | I |
V/G | 0.1207 | likely_benign | 0.1295 | benign | -1.454 | Destabilizing | None | N | 0.189 | neutral | N | 0.452931387 | None | None | I |
V/H | 0.3263 | likely_benign | 0.3604 | ambiguous | -1.065 | Destabilizing | 0.356 | N | 0.427 | neutral | None | None | None | None | I |
V/I | 0.0614 | likely_benign | 0.0618 | benign | -0.678 | Destabilizing | None | N | 0.112 | neutral | N | 0.407793743 | None | None | I |
V/K | 0.219 | likely_benign | 0.2767 | benign | -1.115 | Destabilizing | 0.038 | N | 0.318 | neutral | None | None | None | None | I |
V/L | 0.0896 | likely_benign | 0.0902 | benign | -0.678 | Destabilizing | None | N | 0.098 | neutral | N | 0.374622532 | None | None | I |
V/M | 0.0848 | likely_benign | 0.088 | benign | -0.408 | Destabilizing | 0.007 | N | 0.249 | neutral | None | None | None | None | I |
V/N | 0.129 | likely_benign | 0.1404 | benign | -0.728 | Destabilizing | 0.072 | N | 0.413 | neutral | None | None | None | None | I |
V/P | 0.6366 | likely_pathogenic | 0.6525 | pathogenic | -0.823 | Destabilizing | 0.136 | N | 0.395 | neutral | None | None | None | None | I |
V/Q | 0.183 | likely_benign | 0.2127 | benign | -0.983 | Destabilizing | 0.038 | N | 0.428 | neutral | None | None | None | None | I |
V/R | 0.1987 | likely_benign | 0.2561 | benign | -0.494 | Destabilizing | 0.072 | N | 0.413 | neutral | None | None | None | None | I |
V/S | 0.0984 | likely_benign | 0.104 | benign | -1.083 | Destabilizing | 0.016 | N | 0.319 | neutral | None | None | None | None | I |
V/T | 0.0849 | likely_benign | 0.0863 | benign | -1.056 | Destabilizing | None | N | 0.069 | neutral | None | None | None | None | I |
V/W | 0.605 | likely_pathogenic | 0.6592 | pathogenic | -1.251 | Destabilizing | 0.864 | D | 0.421 | neutral | None | None | None | None | I |
V/Y | 0.3517 | ambiguous | 0.3754 | ambiguous | -1.0 | Destabilizing | 0.356 | N | 0.395 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.