Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 28999 | 87220;87221;87222 | chr2:178558464;178558463;178558462 | chr2:179423191;179423190;179423189 |
N2AB | 27358 | 82297;82298;82299 | chr2:178558464;178558463;178558462 | chr2:179423191;179423190;179423189 |
N2A | 26431 | 79516;79517;79518 | chr2:178558464;178558463;178558462 | chr2:179423191;179423190;179423189 |
N2B | 19934 | 60025;60026;60027 | chr2:178558464;178558463;178558462 | chr2:179423191;179423190;179423189 |
Novex-1 | 20059 | 60400;60401;60402 | chr2:178558464;178558463;178558462 | chr2:179423191;179423190;179423189 |
Novex-2 | 20126 | 60601;60602;60603 | chr2:178558464;178558463;178558462 | chr2:179423191;179423190;179423189 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/D | rs879148150 | None | 0.062 | N | 0.409 | 0.259 | None | gnomAD-4.0.0 | 1.36842E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79888E-06 | 0 | 0 |
H/Y | rs879148150 | None | 0.211 | N | 0.448 | 0.195 | 0.261217442401 | gnomAD-4.0.0 | 1.36842E-06 | None | None | None | None | I | None | 2.98721E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99441E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1497 | likely_benign | 0.1576 | benign | -0.378 | Destabilizing | 0.081 | N | 0.464 | neutral | None | None | None | None | I |
H/C | 0.1046 | likely_benign | 0.1152 | benign | 0.491 | Stabilizing | 0.935 | D | 0.607 | neutral | None | None | None | None | I |
H/D | 0.1536 | likely_benign | 0.1576 | benign | -0.216 | Destabilizing | 0.062 | N | 0.409 | neutral | N | 0.459009211 | None | None | I |
H/E | 0.1617 | likely_benign | 0.1602 | benign | -0.13 | Destabilizing | 0.035 | N | 0.393 | neutral | None | None | None | None | I |
H/F | 0.1912 | likely_benign | 0.1907 | benign | 0.729 | Stabilizing | 0.555 | D | 0.533 | neutral | None | None | None | None | I |
H/G | 0.1901 | likely_benign | 0.2162 | benign | -0.742 | Destabilizing | 0.081 | N | 0.46 | neutral | None | None | None | None | I |
H/I | 0.1686 | likely_benign | 0.1709 | benign | 0.61 | Stabilizing | 0.555 | D | 0.574 | neutral | None | None | None | None | I |
H/K | 0.1617 | likely_benign | 0.1804 | benign | -0.168 | Destabilizing | 0.081 | N | 0.393 | neutral | None | None | None | None | I |
H/L | 0.1002 | likely_benign | 0.1059 | benign | 0.61 | Stabilizing | 0.117 | N | 0.511 | neutral | N | 0.485945096 | None | None | I |
H/M | 0.2957 | likely_benign | 0.3029 | benign | 0.472 | Stabilizing | 0.824 | D | 0.565 | neutral | None | None | None | None | I |
H/N | 0.0782 | likely_benign | 0.0797 | benign | -0.206 | Destabilizing | None | N | 0.247 | neutral | N | 0.424741921 | None | None | I |
H/P | 0.4931 | ambiguous | 0.6145 | pathogenic | 0.303 | Stabilizing | 0.484 | N | 0.563 | neutral | N | 0.504357498 | None | None | I |
H/Q | 0.0977 | likely_benign | 0.1028 | benign | 0.013 | Stabilizing | None | N | 0.367 | neutral | N | 0.449618936 | None | None | I |
H/R | 0.0796 | likely_benign | 0.0897 | benign | -0.764 | Destabilizing | None | N | 0.337 | neutral | N | 0.4169678 | None | None | I |
H/S | 0.1071 | likely_benign | 0.1081 | benign | -0.187 | Destabilizing | 0.081 | N | 0.398 | neutral | None | None | None | None | I |
H/T | 0.1124 | likely_benign | 0.1102 | benign | 0.003 | Stabilizing | 0.149 | N | 0.519 | neutral | None | None | None | None | I |
H/V | 0.1315 | likely_benign | 0.1338 | benign | 0.303 | Stabilizing | 0.38 | N | 0.557 | neutral | None | None | None | None | I |
H/W | 0.3011 | likely_benign | 0.3145 | benign | 0.941 | Stabilizing | 0.935 | D | 0.602 | neutral | None | None | None | None | I |
H/Y | 0.0835 | likely_benign | 0.0799 | benign | 1.086 | Stabilizing | 0.211 | N | 0.448 | neutral | N | 0.476786895 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.