Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29010 | 87253;87254;87255 | chr2:178558431;178558430;178558429 | chr2:179423158;179423157;179423156 |
N2AB | 27369 | 82330;82331;82332 | chr2:178558431;178558430;178558429 | chr2:179423158;179423157;179423156 |
N2A | 26442 | 79549;79550;79551 | chr2:178558431;178558430;178558429 | chr2:179423158;179423157;179423156 |
N2B | 19945 | 60058;60059;60060 | chr2:178558431;178558430;178558429 | chr2:179423158;179423157;179423156 |
Novex-1 | 20070 | 60433;60434;60435 | chr2:178558431;178558430;178558429 | chr2:179423158;179423157;179423156 |
Novex-2 | 20137 | 60634;60635;60636 | chr2:178558431;178558430;178558429 | chr2:179423158;179423157;179423156 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs1702336560 | None | 0.958 | N | 0.583 | 0.39 | 0.381746406553 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/A | rs1702336560 | None | 0.958 | N | 0.583 | 0.39 | 0.381746406553 | gnomAD-4.0.0 | 2.56226E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78558E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2201 | likely_benign | 0.1772 | benign | -0.338 | Destabilizing | 0.958 | D | 0.583 | neutral | N | 0.46977585 | None | None | N |
E/C | 0.8956 | likely_pathogenic | 0.8337 | pathogenic | 0.096 | Stabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
E/D | 0.2704 | likely_benign | 0.1607 | benign | -0.92 | Destabilizing | 0.004 | N | 0.153 | neutral | N | 0.468116782 | None | None | N |
E/F | 0.8769 | likely_pathogenic | 0.8017 | pathogenic | 0.482 | Stabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
E/G | 0.3694 | ambiguous | 0.2704 | benign | -0.805 | Destabilizing | 0.987 | D | 0.651 | neutral | N | 0.485019722 | None | None | N |
E/H | 0.6571 | likely_pathogenic | 0.5437 | ambiguous | 0.298 | Stabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
E/I | 0.4785 | ambiguous | 0.3965 | ambiguous | 0.972 | Stabilizing | 0.995 | D | 0.819 | deleterious | None | None | None | None | N |
E/K | 0.3164 | likely_benign | 0.2514 | benign | -0.187 | Destabilizing | 0.977 | D | 0.479 | neutral | N | 0.506571084 | None | None | N |
E/L | 0.5406 | ambiguous | 0.4502 | ambiguous | 0.972 | Stabilizing | 0.995 | D | 0.801 | deleterious | None | None | None | None | N |
E/M | 0.5744 | likely_pathogenic | 0.5115 | ambiguous | 1.502 | Stabilizing | 0.997 | D | 0.79 | deleterious | None | None | None | None | N |
E/N | 0.4606 | ambiguous | 0.3238 | benign | -0.844 | Destabilizing | 0.956 | D | 0.667 | neutral | None | None | None | None | N |
E/P | 0.7261 | likely_pathogenic | 0.5561 | ambiguous | 0.557 | Stabilizing | 0.965 | D | 0.837 | deleterious | None | None | None | None | N |
E/Q | 0.1864 | likely_benign | 0.1635 | benign | -0.563 | Destabilizing | 0.995 | D | 0.633 | neutral | N | 0.504032211 | None | None | N |
E/R | 0.483 | ambiguous | 0.3949 | ambiguous | -0.05 | Destabilizing | 0.998 | D | 0.736 | prob.delet. | None | None | None | None | N |
E/S | 0.2765 | likely_benign | 0.2095 | benign | -1.319 | Destabilizing | 0.968 | D | 0.487 | neutral | None | None | None | None | N |
E/T | 0.3073 | likely_benign | 0.2423 | benign | -0.892 | Destabilizing | 0.997 | D | 0.747 | deleterious | None | None | None | None | N |
E/V | 0.2852 | likely_benign | 0.237 | benign | 0.557 | Stabilizing | 0.99 | D | 0.799 | deleterious | N | 0.508651384 | None | None | N |
E/W | 0.9604 | likely_pathogenic | 0.9318 | pathogenic | 0.651 | Stabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
E/Y | 0.7802 | likely_pathogenic | 0.6637 | pathogenic | 0.796 | Stabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.