Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29011 | 87256;87257;87258 | chr2:178558428;178558427;178558426 | chr2:179423155;179423154;179423153 |
N2AB | 27370 | 82333;82334;82335 | chr2:178558428;178558427;178558426 | chr2:179423155;179423154;179423153 |
N2A | 26443 | 79552;79553;79554 | chr2:178558428;178558427;178558426 | chr2:179423155;179423154;179423153 |
N2B | 19946 | 60061;60062;60063 | chr2:178558428;178558427;178558426 | chr2:179423155;179423154;179423153 |
Novex-1 | 20071 | 60436;60437;60438 | chr2:178558428;178558427;178558426 | chr2:179423155;179423154;179423153 |
Novex-2 | 20138 | 60637;60638;60639 | chr2:178558428;178558427;178558426 | chr2:179423155;179423154;179423153 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs2154156569 | None | 1.0 | D | 0.857 | 0.875 | 0.778320552042 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.968 | likely_pathogenic | 0.9603 | pathogenic | -2.737 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
Y/C | 0.7275 | likely_pathogenic | 0.6933 | pathogenic | -1.356 | Destabilizing | 1.0 | D | 0.897 | deleterious | D | 0.678043517 | None | None | N |
Y/D | 0.9844 | likely_pathogenic | 0.9786 | pathogenic | -3.167 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | D | 0.678043517 | None | None | N |
Y/E | 0.9941 | likely_pathogenic | 0.9931 | pathogenic | -2.945 | Highly Destabilizing | 1.0 | D | 0.914 | deleterious | None | None | None | None | N |
Y/F | 0.1887 | likely_benign | 0.1944 | benign | -0.877 | Destabilizing | 0.999 | D | 0.763 | deleterious | D | 0.616560963 | None | None | N |
Y/G | 0.96 | likely_pathogenic | 0.9436 | pathogenic | -3.163 | Highly Destabilizing | 1.0 | D | 0.912 | deleterious | None | None | None | None | N |
Y/H | 0.9024 | likely_pathogenic | 0.9041 | pathogenic | -1.887 | Destabilizing | 1.0 | D | 0.857 | deleterious | D | 0.661791991 | None | None | N |
Y/I | 0.7896 | likely_pathogenic | 0.806 | pathogenic | -1.323 | Destabilizing | 0.999 | D | 0.885 | deleterious | None | None | None | None | N |
Y/K | 0.9912 | likely_pathogenic | 0.9909 | pathogenic | -1.927 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
Y/L | 0.778 | likely_pathogenic | 0.7965 | pathogenic | -1.323 | Destabilizing | 0.997 | D | 0.832 | deleterious | None | None | None | None | N |
Y/M | 0.8891 | likely_pathogenic | 0.8816 | pathogenic | -1.033 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
Y/N | 0.8773 | likely_pathogenic | 0.8522 | pathogenic | -2.777 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | D | 0.677841713 | None | None | N |
Y/P | 0.9985 | likely_pathogenic | 0.9982 | pathogenic | -1.809 | Destabilizing | 1.0 | D | 0.926 | deleterious | None | None | None | None | N |
Y/Q | 0.9869 | likely_pathogenic | 0.9859 | pathogenic | -2.477 | Highly Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
Y/R | 0.9786 | likely_pathogenic | 0.9794 | pathogenic | -1.836 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
Y/S | 0.942 | likely_pathogenic | 0.923 | pathogenic | -3.1 | Highly Destabilizing | 1.0 | D | 0.915 | deleterious | D | 0.678043517 | None | None | N |
Y/T | 0.962 | likely_pathogenic | 0.954 | pathogenic | -2.752 | Highly Destabilizing | 1.0 | D | 0.916 | deleterious | None | None | None | None | N |
Y/V | 0.713 | likely_pathogenic | 0.7181 | pathogenic | -1.809 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
Y/W | 0.8453 | likely_pathogenic | 0.8502 | pathogenic | -0.199 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.