Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29012 | 87259;87260;87261 | chr2:178558425;178558424;178558423 | chr2:179423152;179423151;179423150 |
N2AB | 27371 | 82336;82337;82338 | chr2:178558425;178558424;178558423 | chr2:179423152;179423151;179423150 |
N2A | 26444 | 79555;79556;79557 | chr2:178558425;178558424;178558423 | chr2:179423152;179423151;179423150 |
N2B | 19947 | 60064;60065;60066 | chr2:178558425;178558424;178558423 | chr2:179423152;179423151;179423150 |
Novex-1 | 20072 | 60439;60440;60441 | chr2:178558425;178558424;178558423 | chr2:179423152;179423151;179423150 |
Novex-2 | 20139 | 60640;60641;60642 | chr2:178558425;178558424;178558423 | chr2:179423152;179423151;179423150 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.477 | N | 0.579 | 0.326 | 0.468168183122 | gnomAD-4.0.0 | 1.5914E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85799E-06 | 0 | 0 |
F/V | None | None | 0.645 | N | 0.584 | 0.419 | 0.623909720503 | gnomAD-4.0.0 | 1.5914E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77948E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.3928 | ambiguous | 0.3933 | ambiguous | -2.393 | Highly Destabilizing | 0.707 | D | 0.618 | neutral | None | None | None | None | N |
F/C | 0.187 | likely_benign | 0.1895 | benign | -0.863 | Destabilizing | 0.993 | D | 0.699 | prob.neutral | N | 0.490870913 | None | None | N |
F/D | 0.6831 | likely_pathogenic | 0.6692 | pathogenic | -3.198 | Highly Destabilizing | 0.945 | D | 0.749 | deleterious | None | None | None | None | N |
F/E | 0.7034 | likely_pathogenic | 0.6856 | pathogenic | -2.99 | Highly Destabilizing | 0.945 | D | 0.726 | prob.delet. | None | None | None | None | N |
F/G | 0.6682 | likely_pathogenic | 0.6812 | pathogenic | -2.796 | Highly Destabilizing | 0.945 | D | 0.684 | prob.neutral | None | None | None | None | N |
F/H | 0.3081 | likely_benign | 0.291 | benign | -1.667 | Destabilizing | 0.894 | D | 0.667 | neutral | None | None | None | None | N |
F/I | 0.1512 | likely_benign | 0.1527 | benign | -1.067 | Destabilizing | 0.864 | D | 0.572 | neutral | N | 0.441962245 | None | None | N |
F/K | 0.7274 | likely_pathogenic | 0.6867 | pathogenic | -1.674 | Destabilizing | 0.894 | D | 0.729 | prob.delet. | None | None | None | None | N |
F/L | 0.6366 | likely_pathogenic | 0.6079 | pathogenic | -1.067 | Destabilizing | 0.477 | N | 0.579 | neutral | N | 0.430206456 | None | None | N |
F/M | 0.3816 | ambiguous | 0.3685 | ambiguous | -0.571 | Destabilizing | 0.995 | D | 0.604 | neutral | None | None | None | None | N |
F/N | 0.4155 | ambiguous | 0.3919 | ambiguous | -2.26 | Highly Destabilizing | 0.945 | D | 0.765 | deleterious | None | None | None | None | N |
F/P | 0.9934 | likely_pathogenic | 0.9936 | pathogenic | -1.522 | Destabilizing | 0.981 | D | 0.763 | deleterious | None | None | None | None | N |
F/Q | 0.5174 | ambiguous | 0.4904 | ambiguous | -2.166 | Highly Destabilizing | 0.945 | D | 0.768 | deleterious | None | None | None | None | N |
F/R | 0.522 | ambiguous | 0.5046 | ambiguous | -1.393 | Destabilizing | 0.945 | D | 0.764 | deleterious | None | None | None | None | N |
F/S | 0.2322 | likely_benign | 0.2274 | benign | -2.666 | Highly Destabilizing | 0.864 | D | 0.667 | neutral | N | 0.427395438 | None | None | N |
F/T | 0.2902 | likely_benign | 0.286 | benign | -2.358 | Highly Destabilizing | 0.945 | D | 0.68 | prob.neutral | None | None | None | None | N |
F/V | 0.137 | likely_benign | 0.1375 | benign | -1.522 | Destabilizing | 0.645 | D | 0.584 | neutral | N | 0.388762479 | None | None | N |
F/W | 0.4912 | ambiguous | 0.4999 | ambiguous | -0.394 | Destabilizing | 0.985 | D | 0.605 | neutral | None | None | None | None | N |
F/Y | 0.0825 | likely_benign | 0.082 | benign | -0.679 | Destabilizing | 0.002 | N | 0.295 | neutral | N | 0.409100465 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.