Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29047 | 87364;87365;87366 | chr2:178558215;178558214;178558213 | chr2:179422942;179422941;179422940 |
N2AB | 27406 | 82441;82442;82443 | chr2:178558215;178558214;178558213 | chr2:179422942;179422941;179422940 |
N2A | 26479 | 79660;79661;79662 | chr2:178558215;178558214;178558213 | chr2:179422942;179422941;179422940 |
N2B | 19982 | 60169;60170;60171 | chr2:178558215;178558214;178558213 | chr2:179422942;179422941;179422940 |
Novex-1 | 20107 | 60544;60545;60546 | chr2:178558215;178558214;178558213 | chr2:179422942;179422941;179422940 |
Novex-2 | 20174 | 60745;60746;60747 | chr2:178558215;178558214;178558213 | chr2:179422942;179422941;179422940 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1702242034 | None | 0.864 | N | 0.534 | 0.196 | 0.225215365344 | gnomAD-4.0.0 | 1.60761E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86852E-06 | 0 | 0 |
K/R | None | None | 0.013 | N | 0.322 | 0.087 | 0.32714864917 | gnomAD-4.0.0 | 1.56044E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.70627E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2315 | likely_benign | 0.2647 | benign | 0.076 | Stabilizing | 0.547 | D | 0.498 | neutral | None | None | None | None | N |
K/C | 0.6523 | likely_pathogenic | 0.6261 | pathogenic | -0.154 | Destabilizing | 0.985 | D | 0.678 | prob.neutral | None | None | None | None | N |
K/D | 0.4626 | ambiguous | 0.4852 | ambiguous | -0.083 | Destabilizing | 0.894 | D | 0.57 | neutral | None | None | None | None | N |
K/E | 0.1487 | likely_benign | 0.1578 | benign | -0.074 | Destabilizing | 0.645 | D | 0.507 | neutral | N | 0.468042486 | None | None | N |
K/F | 0.7845 | likely_pathogenic | 0.791 | pathogenic | -0.129 | Destabilizing | 0.945 | D | 0.677 | prob.neutral | None | None | None | None | N |
K/G | 0.3079 | likely_benign | 0.3158 | benign | -0.112 | Destabilizing | 0.707 | D | 0.559 | neutral | None | None | None | None | N |
K/H | 0.2883 | likely_benign | 0.2816 | benign | -0.308 | Destabilizing | 0.995 | D | 0.591 | neutral | None | None | None | None | N |
K/I | 0.3846 | ambiguous | 0.4166 | ambiguous | 0.495 | Stabilizing | 0.809 | D | 0.672 | neutral | None | None | None | None | N |
K/L | 0.3371 | likely_benign | 0.3682 | ambiguous | 0.495 | Stabilizing | 0.547 | D | 0.542 | neutral | None | None | None | None | N |
K/M | 0.2215 | likely_benign | 0.2535 | benign | 0.133 | Stabilizing | 0.98 | D | 0.595 | neutral | N | 0.488361831 | None | None | N |
K/N | 0.2662 | likely_benign | 0.3064 | benign | 0.255 | Stabilizing | 0.864 | D | 0.534 | neutral | N | 0.487495039 | None | None | N |
K/P | 0.7995 | likely_pathogenic | 0.8243 | pathogenic | 0.382 | Stabilizing | 0.945 | D | 0.613 | neutral | None | None | None | None | N |
K/Q | 0.1086 | likely_benign | 0.1126 | benign | 0.121 | Stabilizing | 0.864 | D | 0.549 | neutral | N | 0.487148322 | None | None | N |
K/R | 0.0753 | likely_benign | 0.0703 | benign | -0.001 | Destabilizing | 0.013 | N | 0.322 | neutral | N | 0.449110009 | None | None | N |
K/S | 0.2519 | likely_benign | 0.29 | benign | -0.145 | Destabilizing | 0.547 | D | 0.495 | neutral | None | None | None | None | N |
K/T | 0.1196 | likely_benign | 0.1559 | benign | 0.003 | Stabilizing | 0.013 | N | 0.32 | neutral | N | 0.467349053 | None | None | N |
K/V | 0.3334 | likely_benign | 0.3598 | ambiguous | 0.382 | Stabilizing | 0.809 | D | 0.561 | neutral | None | None | None | None | N |
K/W | 0.774 | likely_pathogenic | 0.7339 | pathogenic | -0.205 | Destabilizing | 0.995 | D | 0.673 | neutral | None | None | None | None | N |
K/Y | 0.6326 | likely_pathogenic | 0.6209 | pathogenic | 0.146 | Stabilizing | 0.945 | D | 0.635 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.