Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29066 | 87421;87422;87423 | chr2:178558158;178558157;178558156 | chr2:179422885;179422884;179422883 |
N2AB | 27425 | 82498;82499;82500 | chr2:178558158;178558157;178558156 | chr2:179422885;179422884;179422883 |
N2A | 26498 | 79717;79718;79719 | chr2:178558158;178558157;178558156 | chr2:179422885;179422884;179422883 |
N2B | 20001 | 60226;60227;60228 | chr2:178558158;178558157;178558156 | chr2:179422885;179422884;179422883 |
Novex-1 | 20126 | 60601;60602;60603 | chr2:178558158;178558157;178558156 | chr2:179422885;179422884;179422883 |
Novex-2 | 20193 | 60802;60803;60804 | chr2:178558158;178558157;178558156 | chr2:179422885;179422884;179422883 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1702228996 | None | 0.993 | N | 0.463 | 0.286 | 0.384086055536 | gnomAD-4.0.0 | 1.59132E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43283E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9303 | likely_pathogenic | 0.9305 | pathogenic | -2.663 | Highly Destabilizing | 0.999 | D | 0.688 | prob.neutral | None | None | None | None | N |
I/C | 0.9213 | likely_pathogenic | 0.9261 | pathogenic | -2.072 | Highly Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
I/D | 0.997 | likely_pathogenic | 0.9974 | pathogenic | -2.863 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
I/E | 0.9947 | likely_pathogenic | 0.9955 | pathogenic | -2.607 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
I/F | 0.2981 | likely_benign | 0.3025 | benign | -1.66 | Destabilizing | 1.0 | D | 0.819 | deleterious | N | 0.458743534 | None | None | N |
I/G | 0.989 | likely_pathogenic | 0.9893 | pathogenic | -3.247 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
I/H | 0.9779 | likely_pathogenic | 0.9818 | pathogenic | -2.682 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
I/K | 0.9831 | likely_pathogenic | 0.9869 | pathogenic | -2.186 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
I/L | 0.1711 | likely_benign | 0.183 | benign | -0.964 | Destabilizing | 0.993 | D | 0.523 | neutral | N | 0.501460761 | None | None | N |
I/M | 0.2467 | likely_benign | 0.2576 | benign | -0.917 | Destabilizing | 1.0 | D | 0.78 | deleterious | N | 0.470517913 | None | None | N |
I/N | 0.9563 | likely_pathogenic | 0.9641 | pathogenic | -2.594 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | N | 0.470771403 | None | None | N |
I/P | 0.9952 | likely_pathogenic | 0.995 | pathogenic | -1.513 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
I/Q | 0.9857 | likely_pathogenic | 0.9883 | pathogenic | -2.392 | Highly Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
I/R | 0.9752 | likely_pathogenic | 0.9802 | pathogenic | -1.963 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
I/S | 0.9453 | likely_pathogenic | 0.9517 | pathogenic | -3.337 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | N | 0.470264423 | None | None | N |
I/T | 0.9211 | likely_pathogenic | 0.9312 | pathogenic | -2.911 | Highly Destabilizing | 1.0 | D | 0.758 | deleterious | N | 0.469757444 | None | None | N |
I/V | 0.1361 | likely_benign | 0.1311 | benign | -1.513 | Destabilizing | 0.993 | D | 0.463 | neutral | N | 0.436465133 | None | None | N |
I/W | 0.9676 | likely_pathogenic | 0.9728 | pathogenic | -2.013 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
I/Y | 0.8843 | likely_pathogenic | 0.9002 | pathogenic | -1.737 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.