Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29074 | 87445;87446;87447 | chr2:178558134;178558133;178558132 | chr2:179422861;179422860;179422859 |
N2AB | 27433 | 82522;82523;82524 | chr2:178558134;178558133;178558132 | chr2:179422861;179422860;179422859 |
N2A | 26506 | 79741;79742;79743 | chr2:178558134;178558133;178558132 | chr2:179422861;179422860;179422859 |
N2B | 20009 | 60250;60251;60252 | chr2:178558134;178558133;178558132 | chr2:179422861;179422860;179422859 |
Novex-1 | 20134 | 60625;60626;60627 | chr2:178558134;178558133;178558132 | chr2:179422861;179422860;179422859 |
Novex-2 | 20201 | 60826;60827;60828 | chr2:178558134;178558133;178558132 | chr2:179422861;179422860;179422859 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs761409208 | -0.811 | 1.0 | D | 0.815 | 0.658 | None | gnomAD-2.1.1 | 2.5E-05 | None | None | None | None | I | None | 2.89376E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/A | rs761409208 | -0.811 | 1.0 | D | 0.815 | 0.658 | None | gnomAD-3.1.2 | 6.57E-05 | None | None | None | None | I | None | 2.4122E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/A | rs761409208 | -0.811 | 1.0 | D | 0.815 | 0.658 | None | gnomAD-4.0.0 | 1.05345E-05 | None | None | None | None | I | None | 2.2686E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.6324 | likely_pathogenic | 0.6086 | pathogenic | -1.356 | Destabilizing | 1.0 | D | 0.815 | deleterious | D | 0.52452291 | None | None | I |
P/C | 0.9607 | likely_pathogenic | 0.9489 | pathogenic | -0.991 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
P/D | 0.9992 | likely_pathogenic | 0.9989 | pathogenic | -0.91 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | I |
P/E | 0.9967 | likely_pathogenic | 0.9951 | pathogenic | -0.938 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | I |
P/F | 0.9973 | likely_pathogenic | 0.9958 | pathogenic | -1.182 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | I |
P/G | 0.9708 | likely_pathogenic | 0.9647 | pathogenic | -1.642 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
P/H | 0.9936 | likely_pathogenic | 0.9909 | pathogenic | -1.205 | Destabilizing | 1.0 | D | 0.749 | deleterious | D | 0.537400153 | None | None | I |
P/I | 0.9742 | likely_pathogenic | 0.9622 | pathogenic | -0.691 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
P/K | 0.9979 | likely_pathogenic | 0.9969 | pathogenic | -1.054 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
P/L | 0.8786 | likely_pathogenic | 0.8329 | pathogenic | -0.691 | Destabilizing | 1.0 | D | 0.847 | deleterious | D | 0.532330362 | None | None | I |
P/M | 0.9819 | likely_pathogenic | 0.9738 | pathogenic | -0.542 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
P/N | 0.9976 | likely_pathogenic | 0.9967 | pathogenic | -0.806 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
P/Q | 0.9882 | likely_pathogenic | 0.9829 | pathogenic | -0.995 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
P/R | 0.9918 | likely_pathogenic | 0.988 | pathogenic | -0.558 | Destabilizing | 1.0 | D | 0.837 | deleterious | D | 0.536893174 | None | None | I |
P/S | 0.9489 | likely_pathogenic | 0.9396 | pathogenic | -1.344 | Destabilizing | 1.0 | D | 0.863 | deleterious | D | 0.536386195 | None | None | I |
P/T | 0.9487 | likely_pathogenic | 0.9409 | pathogenic | -1.258 | Destabilizing | 1.0 | D | 0.861 | deleterious | D | 0.536386195 | None | None | I |
P/V | 0.924 | likely_pathogenic | 0.9007 | pathogenic | -0.877 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
P/W | 0.999 | likely_pathogenic | 0.9984 | pathogenic | -1.312 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | I |
P/Y | 0.998 | likely_pathogenic | 0.9968 | pathogenic | -1.021 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.