Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29075 | 87448;87449;87450 | chr2:178558131;178558130;178558129 | chr2:179422858;179422857;179422856 |
N2AB | 27434 | 82525;82526;82527 | chr2:178558131;178558130;178558129 | chr2:179422858;179422857;179422856 |
N2A | 26507 | 79744;79745;79746 | chr2:178558131;178558130;178558129 | chr2:179422858;179422857;179422856 |
N2B | 20010 | 60253;60254;60255 | chr2:178558131;178558130;178558129 | chr2:179422858;179422857;179422856 |
Novex-1 | 20135 | 60628;60629;60630 | chr2:178558131;178558130;178558129 | chr2:179422858;179422857;179422856 |
Novex-2 | 20202 | 60829;60830;60831 | chr2:178558131;178558130;178558129 | chr2:179422858;179422857;179422856 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs1324821269 | 0.391 | 1.0 | N | 0.744 | 0.412 | 0.38242337071 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/Q | rs1324821269 | 0.391 | 1.0 | N | 0.744 | 0.412 | 0.38242337071 | gnomAD-4.0.0 | 1.59117E-06 | None | None | None | None | I | None | 0 | 2.28645E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.225 | likely_benign | 0.1914 | benign | 0.066 | Stabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | I |
K/C | 0.6033 | likely_pathogenic | 0.5073 | ambiguous | -0.245 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | I |
K/D | 0.5236 | ambiguous | 0.4475 | ambiguous | -0.052 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | I |
K/E | 0.1584 | likely_benign | 0.1346 | benign | -0.036 | Destabilizing | 0.999 | D | 0.663 | neutral | N | 0.488439188 | None | None | I |
K/F | 0.7362 | likely_pathogenic | 0.6493 | pathogenic | -0.083 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | I |
K/G | 0.412 | ambiguous | 0.3417 | ambiguous | -0.143 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | I |
K/H | 0.2592 | likely_benign | 0.2184 | benign | -0.357 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
K/I | 0.298 | likely_benign | 0.2546 | benign | 0.542 | Stabilizing | 1.0 | D | 0.763 | deleterious | D | 0.530982031 | None | None | I |
K/L | 0.3144 | likely_benign | 0.262 | benign | 0.542 | Stabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | I |
K/M | 0.2245 | likely_benign | 0.1849 | benign | 0.187 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
K/N | 0.3584 | ambiguous | 0.2938 | benign | 0.128 | Stabilizing | 1.0 | D | 0.757 | deleterious | N | 0.485985953 | None | None | I |
K/P | 0.8574 | likely_pathogenic | 0.8056 | pathogenic | 0.411 | Stabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | I |
K/Q | 0.121 | likely_benign | 0.1083 | benign | -0.007 | Destabilizing | 1.0 | D | 0.744 | deleterious | N | 0.510662687 | None | None | I |
K/R | 0.0778 | likely_benign | 0.0732 | benign | -0.084 | Destabilizing | 0.999 | D | 0.615 | neutral | N | 0.507219737 | None | None | I |
K/S | 0.2988 | likely_benign | 0.2492 | benign | -0.301 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | I |
K/T | 0.1244 | likely_benign | 0.1096 | benign | -0.138 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | N | 0.438109155 | None | None | I |
K/V | 0.2172 | likely_benign | 0.1876 | benign | 0.411 | Stabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
K/W | 0.7747 | likely_pathogenic | 0.6705 | pathogenic | -0.131 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
K/Y | 0.614 | likely_pathogenic | 0.5114 | ambiguous | 0.219 | Stabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.