Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29076 | 87451;87452;87453 | chr2:178558128;178558127;178558126 | chr2:179422855;179422854;179422853 |
N2AB | 27435 | 82528;82529;82530 | chr2:178558128;178558127;178558126 | chr2:179422855;179422854;179422853 |
N2A | 26508 | 79747;79748;79749 | chr2:178558128;178558127;178558126 | chr2:179422855;179422854;179422853 |
N2B | 20011 | 60256;60257;60258 | chr2:178558128;178558127;178558126 | chr2:179422855;179422854;179422853 |
Novex-1 | 20136 | 60631;60632;60633 | chr2:178558128;178558127;178558126 | chr2:179422855;179422854;179422853 |
Novex-2 | 20203 | 60832;60833;60834 | chr2:178558128;178558127;178558126 | chr2:179422855;179422854;179422853 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.999 | D | 0.676 | 0.713 | 0.737052393128 | gnomAD-4.0.0 | 2.05256E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 5.20472E-04 | 0 | 0 | 0 |
V/L | rs776219010 | -0.313 | 0.997 | D | 0.704 | 0.473 | 0.678378258981 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3603 | ambiguous | 0.3381 | benign | -1.415 | Destabilizing | 0.999 | D | 0.676 | prob.neutral | D | 0.536242762 | None | None | I |
V/C | 0.79 | likely_pathogenic | 0.7648 | pathogenic | -1.074 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | I |
V/D | 0.9672 | likely_pathogenic | 0.9487 | pathogenic | -1.129 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | I |
V/E | 0.9322 | likely_pathogenic | 0.8999 | pathogenic | -1.088 | Destabilizing | 1.0 | D | 0.867 | deleterious | D | 0.574630292 | None | None | I |
V/F | 0.3382 | likely_benign | 0.2637 | benign | -0.967 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
V/G | 0.625 | likely_pathogenic | 0.5746 | pathogenic | -1.772 | Destabilizing | 1.0 | D | 0.859 | deleterious | D | 0.574630292 | None | None | I |
V/H | 0.9561 | likely_pathogenic | 0.9368 | pathogenic | -1.272 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
V/I | 0.079 | likely_benign | 0.0776 | benign | -0.524 | Destabilizing | 0.998 | D | 0.648 | neutral | None | None | None | None | I |
V/K | 0.9397 | likely_pathogenic | 0.915 | pathogenic | -1.269 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | I |
V/L | 0.2666 | likely_benign | 0.2293 | benign | -0.524 | Destabilizing | 0.997 | D | 0.704 | prob.neutral | D | 0.53973595 | None | None | I |
V/M | 0.2396 | likely_benign | 0.1936 | benign | -0.522 | Destabilizing | 1.0 | D | 0.753 | deleterious | D | 0.557975158 | None | None | I |
V/N | 0.884 | likely_pathogenic | 0.8507 | pathogenic | -1.115 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
V/P | 0.8215 | likely_pathogenic | 0.8066 | pathogenic | -0.786 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | I |
V/Q | 0.9212 | likely_pathogenic | 0.8848 | pathogenic | -1.186 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | I |
V/R | 0.9285 | likely_pathogenic | 0.8959 | pathogenic | -0.845 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | I |
V/S | 0.7203 | likely_pathogenic | 0.671 | pathogenic | -1.671 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | I |
V/T | 0.5037 | ambiguous | 0.4841 | ambiguous | -1.5 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | I |
V/W | 0.9404 | likely_pathogenic | 0.9072 | pathogenic | -1.174 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
V/Y | 0.8007 | likely_pathogenic | 0.7296 | pathogenic | -0.875 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.