Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29103 | 87532;87533;87534 | chr2:178558047;178558046;178558045 | chr2:179422774;179422773;179422772 |
N2AB | 27462 | 82609;82610;82611 | chr2:178558047;178558046;178558045 | chr2:179422774;179422773;179422772 |
N2A | 26535 | 79828;79829;79830 | chr2:178558047;178558046;178558045 | chr2:179422774;179422773;179422772 |
N2B | 20038 | 60337;60338;60339 | chr2:178558047;178558046;178558045 | chr2:179422774;179422773;179422772 |
Novex-1 | 20163 | 60712;60713;60714 | chr2:178558047;178558046;178558045 | chr2:179422774;179422773;179422772 |
Novex-2 | 20230 | 60913;60914;60915 | chr2:178558047;178558046;178558045 | chr2:179422774;179422773;179422772 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs375374455 | -0.86 | 0.514 | N | 0.526 | 0.178 | None | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 1.29149E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
N/S | rs375374455 | -0.86 | 0.514 | N | 0.526 | 0.178 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/S | rs375374455 | -0.86 | 0.514 | N | 0.526 | 0.178 | None | gnomAD-4.0.0 | 4.33748E-06 | None | None | None | None | N | None | 5.33803E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69511E-06 | 0 | 1.60087E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1981 | likely_benign | 0.1902 | benign | -0.909 | Destabilizing | 0.737 | D | 0.485 | neutral | None | None | None | None | N |
N/C | 0.1495 | likely_benign | 0.1394 | benign | -0.453 | Destabilizing | 0.998 | D | 0.592 | neutral | None | None | None | None | N |
N/D | 0.2515 | likely_benign | 0.2358 | benign | -1.779 | Destabilizing | 0.912 | D | 0.503 | neutral | N | 0.438301157 | None | None | N |
N/E | 0.5204 | ambiguous | 0.477 | ambiguous | -1.583 | Destabilizing | 0.932 | D | 0.475 | neutral | None | None | None | None | N |
N/F | 0.2879 | likely_benign | 0.2928 | benign | -0.542 | Destabilizing | 0.773 | D | 0.583 | neutral | None | None | None | None | N |
N/G | 0.3233 | likely_benign | 0.3077 | benign | -1.293 | Destabilizing | 0.932 | D | 0.494 | neutral | None | None | None | None | N |
N/H | 0.0719 | likely_benign | 0.0676 | benign | -0.945 | Destabilizing | 0.947 | D | 0.547 | neutral | N | 0.424563855 | None | None | N |
N/I | 0.1043 | likely_benign | 0.1042 | benign | 0.096 | Stabilizing | 0.064 | N | 0.506 | neutral | N | 0.373076242 | None | None | N |
N/K | 0.4146 | ambiguous | 0.3691 | ambiguous | -0.331 | Destabilizing | 0.912 | D | 0.463 | neutral | N | 0.395953102 | None | None | N |
N/L | 0.137 | likely_benign | 0.1341 | benign | 0.096 | Stabilizing | 0.584 | D | 0.48 | neutral | None | None | None | None | N |
N/M | 0.215 | likely_benign | 0.2146 | benign | 0.381 | Stabilizing | 0.98 | D | 0.573 | neutral | None | None | None | None | N |
N/P | 0.9097 | likely_pathogenic | 0.8605 | pathogenic | -0.21 | Destabilizing | 0.993 | D | 0.582 | neutral | None | None | None | None | N |
N/Q | 0.3273 | likely_benign | 0.3018 | benign | -1.084 | Destabilizing | 0.993 | D | 0.521 | neutral | None | None | None | None | N |
N/R | 0.3998 | ambiguous | 0.3473 | ambiguous | -0.467 | Destabilizing | 0.98 | D | 0.519 | neutral | None | None | None | None | N |
N/S | 0.0733 | likely_benign | 0.0777 | benign | -1.236 | Destabilizing | 0.514 | D | 0.526 | neutral | N | 0.40797825 | None | None | N |
N/T | 0.0845 | likely_benign | 0.083 | benign | -0.853 | Destabilizing | 0.064 | N | 0.23 | neutral | N | 0.389234986 | None | None | N |
N/V | 0.1318 | likely_benign | 0.128 | benign | -0.21 | Destabilizing | 0.083 | N | 0.526 | neutral | None | None | None | None | N |
N/W | 0.6493 | likely_pathogenic | 0.6186 | pathogenic | -0.435 | Destabilizing | 0.995 | D | 0.598 | neutral | None | None | None | None | N |
N/Y | 0.111 | likely_benign | 0.1059 | benign | -0.091 | Destabilizing | 0.064 | N | 0.487 | neutral | N | 0.393491587 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.