Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29107 | 87544;87545;87546 | chr2:178558035;178558034;178558033 | chr2:179422762;179422761;179422760 |
N2AB | 27466 | 82621;82622;82623 | chr2:178558035;178558034;178558033 | chr2:179422762;179422761;179422760 |
N2A | 26539 | 79840;79841;79842 | chr2:178558035;178558034;178558033 | chr2:179422762;179422761;179422760 |
N2B | 20042 | 60349;60350;60351 | chr2:178558035;178558034;178558033 | chr2:179422762;179422761;179422760 |
Novex-1 | 20167 | 60724;60725;60726 | chr2:178558035;178558034;178558033 | chr2:179422762;179422761;179422760 |
Novex-2 | 20234 | 60925;60926;60927 | chr2:178558035;178558034;178558033 | chr2:179422762;179422761;179422760 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.999 | N | 0.654 | 0.339 | 0.372268306217 | gnomAD-4.0.0 | 1.36833E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99416E-07 | 1.15931E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0708 | likely_benign | 0.0642 | benign | -0.441 | Destabilizing | 0.98 | D | 0.469 | neutral | None | None | None | None | N |
S/C | 0.1041 | likely_benign | 0.0834 | benign | -1.002 | Destabilizing | 0.391 | N | 0.483 | neutral | N | 0.463698246 | None | None | N |
S/D | 0.9781 | likely_pathogenic | 0.9675 | pathogenic | -2.217 | Highly Destabilizing | 1.0 | D | 0.668 | neutral | None | None | None | None | N |
S/E | 0.9842 | likely_pathogenic | 0.9786 | pathogenic | -2.137 | Highly Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
S/F | 0.9106 | likely_pathogenic | 0.8421 | pathogenic | -0.757 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
S/G | 0.1892 | likely_benign | 0.1539 | benign | -0.684 | Destabilizing | 0.994 | D | 0.557 | neutral | N | 0.490567855 | None | None | N |
S/H | 0.9749 | likely_pathogenic | 0.9599 | pathogenic | -1.162 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | N |
S/I | 0.3617 | ambiguous | 0.3231 | benign | 0.109 | Stabilizing | 0.998 | D | 0.736 | prob.delet. | N | 0.496362451 | None | None | N |
S/K | 0.9972 | likely_pathogenic | 0.9957 | pathogenic | -0.654 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
S/L | 0.3352 | likely_benign | 0.2443 | benign | 0.109 | Stabilizing | 0.992 | D | 0.677 | prob.neutral | None | None | None | None | N |
S/M | 0.4779 | ambiguous | 0.377 | ambiguous | 0.126 | Stabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
S/N | 0.7639 | likely_pathogenic | 0.6858 | pathogenic | -1.258 | Destabilizing | 0.999 | D | 0.654 | neutral | N | 0.490567855 | None | None | N |
S/P | 0.8182 | likely_pathogenic | 0.7539 | pathogenic | -0.043 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
S/Q | 0.9817 | likely_pathogenic | 0.9737 | pathogenic | -1.38 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | N |
S/R | 0.9942 | likely_pathogenic | 0.9918 | pathogenic | -0.563 | Destabilizing | 0.999 | D | 0.741 | deleterious | N | 0.490567855 | None | None | N |
S/T | 0.1062 | likely_benign | 0.0873 | benign | -0.88 | Destabilizing | 0.994 | D | 0.561 | neutral | N | 0.505640869 | None | None | N |
S/V | 0.2718 | likely_benign | 0.2353 | benign | -0.043 | Destabilizing | 0.998 | D | 0.707 | prob.neutral | None | None | None | None | N |
S/W | 0.9667 | likely_pathogenic | 0.9431 | pathogenic | -1.005 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
S/Y | 0.9128 | likely_pathogenic | 0.8613 | pathogenic | -0.535 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.