Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29116 | 87571;87572;87573 | chr2:178558008;178558007;178558006 | chr2:179422735;179422734;179422733 |
N2AB | 27475 | 82648;82649;82650 | chr2:178558008;178558007;178558006 | chr2:179422735;179422734;179422733 |
N2A | 26548 | 79867;79868;79869 | chr2:178558008;178558007;178558006 | chr2:179422735;179422734;179422733 |
N2B | 20051 | 60376;60377;60378 | chr2:178558008;178558007;178558006 | chr2:179422735;179422734;179422733 |
Novex-1 | 20176 | 60751;60752;60753 | chr2:178558008;178558007;178558006 | chr2:179422735;179422734;179422733 |
Novex-2 | 20243 | 60952;60953;60954 | chr2:178558008;178558007;178558006 | chr2:179422735;179422734;179422733 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.896 | N | 0.558 | 0.279 | 0.276482976112 | gnomAD-4.0.0 | 6.84218E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65645E-05 |
E/K | rs1472877475 | -0.663 | 0.896 | N | 0.476 | 0.192 | 0.191931220699 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 1.14784E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2102 | likely_benign | 0.2002 | benign | -0.899 | Destabilizing | 0.896 | D | 0.491 | neutral | N | 0.483432361 | None | None | N |
E/C | 0.8243 | likely_pathogenic | 0.805 | pathogenic | -0.571 | Destabilizing | 0.999 | D | 0.782 | deleterious | None | None | None | None | N |
E/D | 0.1217 | likely_benign | 0.1083 | benign | -1.382 | Destabilizing | 0.004 | N | 0.222 | neutral | N | 0.45449632 | None | None | N |
E/F | 0.7468 | likely_pathogenic | 0.7207 | pathogenic | -0.989 | Destabilizing | 0.996 | D | 0.789 | deleterious | None | None | None | None | N |
E/G | 0.2418 | likely_benign | 0.2478 | benign | -1.223 | Destabilizing | 0.896 | D | 0.558 | neutral | N | 0.476314387 | None | None | N |
E/H | 0.4564 | ambiguous | 0.4109 | ambiguous | -1.264 | Destabilizing | 0.996 | D | 0.544 | neutral | None | None | None | None | N |
E/I | 0.3598 | ambiguous | 0.3354 | benign | -0.025 | Destabilizing | 0.988 | D | 0.774 | deleterious | None | None | None | None | N |
E/K | 0.2551 | likely_benign | 0.2492 | benign | -0.663 | Destabilizing | 0.896 | D | 0.476 | neutral | N | 0.441431022 | None | None | N |
E/L | 0.4404 | ambiguous | 0.4058 | ambiguous | -0.025 | Destabilizing | 0.988 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/M | 0.4764 | ambiguous | 0.4538 | ambiguous | 0.469 | Stabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/N | 0.2554 | likely_benign | 0.2346 | benign | -0.944 | Destabilizing | 0.851 | D | 0.473 | neutral | None | None | None | None | N |
E/P | 0.9309 | likely_pathogenic | 0.9198 | pathogenic | -0.296 | Destabilizing | 0.988 | D | 0.591 | neutral | None | None | None | None | N |
E/Q | 0.1724 | likely_benign | 0.1644 | benign | -0.854 | Destabilizing | 0.946 | D | 0.523 | neutral | N | 0.483259002 | None | None | N |
E/R | 0.3832 | ambiguous | 0.3608 | ambiguous | -0.646 | Destabilizing | 0.988 | D | 0.52 | neutral | None | None | None | None | N |
E/S | 0.2159 | likely_benign | 0.1994 | benign | -1.342 | Destabilizing | 0.919 | D | 0.468 | neutral | None | None | None | None | N |
E/T | 0.2387 | likely_benign | 0.2201 | benign | -1.053 | Destabilizing | 0.919 | D | 0.54 | neutral | None | None | None | None | N |
E/V | 0.2303 | likely_benign | 0.2108 | benign | -0.296 | Destabilizing | 0.984 | D | 0.611 | neutral | N | 0.459843425 | None | None | N |
E/W | 0.9037 | likely_pathogenic | 0.88 | pathogenic | -0.973 | Destabilizing | 0.999 | D | 0.746 | deleterious | None | None | None | None | N |
E/Y | 0.6048 | likely_pathogenic | 0.5693 | pathogenic | -0.754 | Destabilizing | 0.996 | D | 0.734 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.