Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2912 | 8959;8960;8961 | chr2:178769847;178769846;178769845 | chr2:179634574;179634573;179634572 |
N2AB | 2912 | 8959;8960;8961 | chr2:178769847;178769846;178769845 | chr2:179634574;179634573;179634572 |
N2A | 2912 | 8959;8960;8961 | chr2:178769847;178769846;178769845 | chr2:179634574;179634573;179634572 |
N2B | 2866 | 8821;8822;8823 | chr2:178769847;178769846;178769845 | chr2:179634574;179634573;179634572 |
Novex-1 | 2866 | 8821;8822;8823 | chr2:178769847;178769846;178769845 | chr2:179634574;179634573;179634572 |
Novex-2 | 2866 | 8821;8822;8823 | chr2:178769847;178769846;178769845 | chr2:179634574;179634573;179634572 |
Novex-3 | 2912 | 8959;8960;8961 | chr2:178769847;178769846;178769845 | chr2:179634574;179634573;179634572 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.971 | N | 0.746 | 0.569 | 0.693576915185 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0569 | likely_benign | 0.0546 | benign | -0.719 | Destabilizing | 0.006 | N | 0.273 | neutral | N | 0.455608119 | None | None | N |
S/C | 0.2467 | likely_benign | 0.2062 | benign | -0.372 | Destabilizing | 0.992 | D | 0.722 | prob.delet. | N | 0.518417153 | None | None | N |
S/D | 0.9847 | likely_pathogenic | 0.976 | pathogenic | -0.677 | Destabilizing | 0.978 | D | 0.619 | neutral | None | None | None | None | N |
S/E | 0.984 | likely_pathogenic | 0.9741 | pathogenic | -0.594 | Destabilizing | 0.86 | D | 0.604 | neutral | None | None | None | None | N |
S/F | 0.8946 | likely_pathogenic | 0.8156 | pathogenic | -0.72 | Destabilizing | 0.971 | D | 0.746 | deleterious | N | 0.461663826 | None | None | N |
S/G | 0.2866 | likely_benign | 0.2483 | benign | -1.02 | Destabilizing | 0.559 | D | 0.588 | neutral | None | None | None | None | N |
S/H | 0.9577 | likely_pathogenic | 0.942 | pathogenic | -1.358 | Destabilizing | 0.998 | D | 0.723 | prob.delet. | None | None | None | None | N |
S/I | 0.8749 | likely_pathogenic | 0.7807 | pathogenic | 0.007 | Stabilizing | 0.956 | D | 0.719 | prob.delet. | None | None | None | None | N |
S/K | 0.9968 | likely_pathogenic | 0.9944 | pathogenic | -0.708 | Destabilizing | 0.86 | D | 0.596 | neutral | None | None | None | None | N |
S/L | 0.595 | likely_pathogenic | 0.4789 | ambiguous | 0.007 | Stabilizing | 0.754 | D | 0.653 | neutral | None | None | None | None | N |
S/M | 0.7769 | likely_pathogenic | 0.6839 | pathogenic | 0.008 | Stabilizing | 0.998 | D | 0.725 | prob.delet. | None | None | None | None | N |
S/N | 0.9011 | likely_pathogenic | 0.8632 | pathogenic | -0.809 | Destabilizing | 0.978 | D | 0.631 | neutral | None | None | None | None | N |
S/P | 0.8511 | likely_pathogenic | 0.7773 | pathogenic | -0.202 | Destabilizing | 0.971 | D | 0.716 | prob.delet. | N | 0.517278567 | None | None | N |
S/Q | 0.9715 | likely_pathogenic | 0.957 | pathogenic | -0.73 | Destabilizing | 0.978 | D | 0.676 | prob.neutral | None | None | None | None | N |
S/R | 0.9914 | likely_pathogenic | 0.9874 | pathogenic | -0.776 | Destabilizing | 0.956 | D | 0.721 | prob.delet. | None | None | None | None | N |
S/T | 0.3333 | likely_benign | 0.2599 | benign | -0.683 | Destabilizing | 0.822 | D | 0.585 | neutral | N | 0.501207226 | None | None | N |
S/V | 0.6479 | likely_pathogenic | 0.5265 | ambiguous | -0.202 | Destabilizing | 0.754 | D | 0.66 | neutral | None | None | None | None | N |
S/W | 0.9643 | likely_pathogenic | 0.9369 | pathogenic | -0.902 | Destabilizing | 0.998 | D | 0.748 | deleterious | None | None | None | None | N |
S/Y | 0.882 | likely_pathogenic | 0.8053 | pathogenic | -0.572 | Destabilizing | 0.99 | D | 0.751 | deleterious | N | 0.487535914 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.