Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29148 | 87667;87668;87669 | chr2:178557912;178557911;178557910 | chr2:179422639;179422638;179422637 |
N2AB | 27507 | 82744;82745;82746 | chr2:178557912;178557911;178557910 | chr2:179422639;179422638;179422637 |
N2A | 26580 | 79963;79964;79965 | chr2:178557912;178557911;178557910 | chr2:179422639;179422638;179422637 |
N2B | 20083 | 60472;60473;60474 | chr2:178557912;178557911;178557910 | chr2:179422639;179422638;179422637 |
Novex-1 | 20208 | 60847;60848;60849 | chr2:178557912;178557911;178557910 | chr2:179422639;179422638;179422637 |
Novex-2 | 20275 | 61048;61049;61050 | chr2:178557912;178557911;178557910 | chr2:179422639;179422638;179422637 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.959 | N | 0.437 | 0.21 | 0.299086750705 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0898 | likely_benign | 0.0879 | benign | -0.532 | Destabilizing | 0.863 | D | 0.443 | neutral | None | None | None | None | I |
S/C | 0.1093 | likely_benign | 0.1107 | benign | -0.417 | Destabilizing | 0.077 | N | 0.287 | neutral | D | 0.525565064 | None | None | I |
S/D | 0.3244 | likely_benign | 0.3189 | benign | 0.123 | Stabilizing | 0.997 | D | 0.437 | neutral | None | None | None | None | I |
S/E | 0.4403 | ambiguous | 0.4477 | ambiguous | 0.088 | Stabilizing | 0.99 | D | 0.431 | neutral | None | None | None | None | I |
S/F | 0.2164 | likely_benign | 0.2235 | benign | -0.853 | Destabilizing | 0.1 | N | 0.29 | neutral | None | None | None | None | I |
S/G | 0.0914 | likely_benign | 0.0819 | benign | -0.738 | Destabilizing | 0.959 | D | 0.437 | neutral | N | 0.475386959 | None | None | I |
S/H | 0.3214 | likely_benign | 0.3218 | benign | -1.241 | Destabilizing | 0.991 | D | 0.44 | neutral | None | None | None | None | I |
S/I | 0.2209 | likely_benign | 0.2377 | benign | -0.108 | Destabilizing | 0.976 | D | 0.493 | neutral | N | 0.464111173 | None | None | I |
S/K | 0.6174 | likely_pathogenic | 0.6005 | pathogenic | -0.607 | Destabilizing | 0.969 | D | 0.433 | neutral | None | None | None | None | I |
S/L | 0.1134 | likely_benign | 0.1205 | benign | -0.108 | Destabilizing | 0.884 | D | 0.481 | neutral | None | None | None | None | I |
S/M | 0.1803 | likely_benign | 0.196 | benign | 0.074 | Stabilizing | 0.997 | D | 0.431 | neutral | None | None | None | None | I |
S/N | 0.1321 | likely_benign | 0.1242 | benign | -0.476 | Destabilizing | 0.996 | D | 0.479 | neutral | N | 0.492548568 | None | None | I |
S/P | 0.77 | likely_pathogenic | 0.8067 | pathogenic | -0.216 | Destabilizing | 0.997 | D | 0.461 | neutral | None | None | None | None | I |
S/Q | 0.4581 | ambiguous | 0.4583 | ambiguous | -0.63 | Destabilizing | 0.997 | D | 0.459 | neutral | None | None | None | None | I |
S/R | 0.528 | ambiguous | 0.5135 | ambiguous | -0.5 | Destabilizing | 0.996 | D | 0.459 | neutral | N | 0.494548723 | None | None | I |
S/T | 0.0771 | likely_benign | 0.0782 | benign | -0.529 | Destabilizing | 0.959 | D | 0.468 | neutral | N | 0.414084998 | None | None | I |
S/V | 0.205 | likely_benign | 0.2248 | benign | -0.216 | Destabilizing | 0.939 | D | 0.505 | neutral | None | None | None | None | I |
S/W | 0.3427 | ambiguous | 0.365 | ambiguous | -0.843 | Destabilizing | 0.999 | D | 0.526 | neutral | None | None | None | None | I |
S/Y | 0.1966 | likely_benign | 0.2058 | benign | -0.57 | Destabilizing | 0.321 | N | 0.289 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.