Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29171 | 87736;87737;87738 | chr2:178557843;178557842;178557841 | chr2:179422570;179422569;179422568 |
N2AB | 27530 | 82813;82814;82815 | chr2:178557843;178557842;178557841 | chr2:179422570;179422569;179422568 |
N2A | 26603 | 80032;80033;80034 | chr2:178557843;178557842;178557841 | chr2:179422570;179422569;179422568 |
N2B | 20106 | 60541;60542;60543 | chr2:178557843;178557842;178557841 | chr2:179422570;179422569;179422568 |
Novex-1 | 20231 | 60916;60917;60918 | chr2:178557843;178557842;178557841 | chr2:179422570;179422569;179422568 |
Novex-2 | 20298 | 61117;61118;61119 | chr2:178557843;178557842;178557841 | chr2:179422570;179422569;179422568 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1474922930 | -0.827 | 0.999 | N | 0.579 | 0.542 | 0.388970301349 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 9.94E-05 | 0 | None | 0 | None | 0 | 0 | 0 |
T/A | rs1474922930 | -0.827 | 0.999 | N | 0.579 | 0.542 | 0.388970301349 | gnomAD-4.0.0 | 1.36834E-06 | None | None | None | None | I | None | 0 | 0 | None | 3.82643E-05 | 0 | None | 0 | 0 | 8.99431E-07 | 0 | 0 |
T/S | None | None | 0.999 | N | 0.569 | 0.443 | 0.341226946553 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.265 | likely_benign | 0.3987 | ambiguous | -0.51 | Destabilizing | 0.999 | D | 0.579 | neutral | N | 0.485691286 | None | None | I |
T/C | 0.753 | likely_pathogenic | 0.8483 | pathogenic | -0.246 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | I |
T/D | 0.8634 | likely_pathogenic | 0.9189 | pathogenic | -0.286 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | I |
T/E | 0.8433 | likely_pathogenic | 0.9113 | pathogenic | -0.353 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
T/F | 0.7647 | likely_pathogenic | 0.8676 | pathogenic | -0.875 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | I |
T/G | 0.5168 | ambiguous | 0.626 | pathogenic | -0.678 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
T/H | 0.6914 | likely_pathogenic | 0.7836 | pathogenic | -1.042 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
T/I | 0.6754 | likely_pathogenic | 0.8084 | pathogenic | -0.174 | Destabilizing | 1.0 | D | 0.855 | deleterious | N | 0.515097354 | None | None | I |
T/K | 0.7235 | likely_pathogenic | 0.7945 | pathogenic | -0.582 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | I |
T/L | 0.3232 | likely_benign | 0.4723 | ambiguous | -0.174 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | I |
T/M | 0.207 | likely_benign | 0.3052 | benign | 0.217 | Stabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | I |
T/N | 0.2624 | likely_benign | 0.365 | ambiguous | -0.349 | Destabilizing | 1.0 | D | 0.807 | deleterious | N | 0.498127746 | None | None | I |
T/P | 0.7897 | likely_pathogenic | 0.8395 | pathogenic | -0.256 | Destabilizing | 1.0 | D | 0.844 | deleterious | N | 0.510342907 | None | None | I |
T/Q | 0.5962 | likely_pathogenic | 0.7004 | pathogenic | -0.654 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | I |
T/R | 0.6724 | likely_pathogenic | 0.7543 | pathogenic | -0.236 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | I |
T/S | 0.1904 | likely_benign | 0.266 | benign | -0.543 | Destabilizing | 0.999 | D | 0.569 | neutral | N | 0.448333644 | None | None | I |
T/V | 0.5165 | ambiguous | 0.6742 | pathogenic | -0.256 | Destabilizing | 0.999 | D | 0.654 | neutral | None | None | None | None | I |
T/W | 0.9341 | likely_pathogenic | 0.9615 | pathogenic | -0.832 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | I |
T/Y | 0.7759 | likely_pathogenic | 0.8703 | pathogenic | -0.585 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.