Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29175 | 87748;87749;87750 | chr2:178557831;178557830;178557829 | chr2:179422558;179422557;179422556 |
N2AB | 27534 | 82825;82826;82827 | chr2:178557831;178557830;178557829 | chr2:179422558;179422557;179422556 |
N2A | 26607 | 80044;80045;80046 | chr2:178557831;178557830;178557829 | chr2:179422558;179422557;179422556 |
N2B | 20110 | 60553;60554;60555 | chr2:178557831;178557830;178557829 | chr2:179422558;179422557;179422556 |
Novex-1 | 20235 | 60928;60929;60930 | chr2:178557831;178557830;178557829 | chr2:179422558;179422557;179422556 |
Novex-2 | 20302 | 61129;61130;61131 | chr2:178557831;178557830;178557829 | chr2:179422558;179422557;179422556 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | None | N | 0.201 | 0.129 | 0.276898752692 | gnomAD-4.0.0 | 1.36834E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79886E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7064 | likely_pathogenic | 0.747 | pathogenic | -2.992 | Highly Destabilizing | 0.007 | N | 0.546 | neutral | None | None | None | None | N |
L/C | 0.7487 | likely_pathogenic | 0.7486 | pathogenic | -2.32 | Highly Destabilizing | 0.356 | N | 0.712 | prob.delet. | None | None | None | None | N |
L/D | 0.9978 | likely_pathogenic | 0.9981 | pathogenic | -3.73 | Highly Destabilizing | 0.356 | N | 0.735 | prob.delet. | None | None | None | None | N |
L/E | 0.9879 | likely_pathogenic | 0.9886 | pathogenic | -3.409 | Highly Destabilizing | 0.136 | N | 0.686 | prob.neutral | None | None | None | None | N |
L/F | 0.5011 | ambiguous | 0.5413 | ambiguous | -1.843 | Destabilizing | 0.072 | N | 0.496 | neutral | None | None | None | None | N |
L/G | 0.9496 | likely_pathogenic | 0.9616 | pathogenic | -3.621 | Highly Destabilizing | 0.136 | N | 0.679 | prob.neutral | None | None | None | None | N |
L/H | 0.9754 | likely_pathogenic | 0.9746 | pathogenic | -3.239 | Highly Destabilizing | 0.864 | D | 0.807 | deleterious | None | None | None | None | N |
L/I | 0.0538 | likely_benign | 0.0626 | benign | -1.107 | Destabilizing | None | N | 0.201 | neutral | N | 0.363805319 | None | None | N |
L/K | 0.9894 | likely_pathogenic | 0.9891 | pathogenic | -2.558 | Highly Destabilizing | 0.136 | N | 0.655 | neutral | None | None | None | None | N |
L/M | 0.2299 | likely_benign | 0.2491 | benign | -1.169 | Destabilizing | 0.214 | N | 0.522 | neutral | None | None | None | None | N |
L/N | 0.9846 | likely_pathogenic | 0.9842 | pathogenic | -3.245 | Highly Destabilizing | 0.628 | D | 0.782 | deleterious | None | None | None | None | N |
L/P | 0.9786 | likely_pathogenic | 0.9846 | pathogenic | -1.725 | Destabilizing | 0.295 | N | 0.745 | deleterious | D | 0.528856085 | None | None | N |
L/Q | 0.9645 | likely_pathogenic | 0.9657 | pathogenic | -2.919 | Highly Destabilizing | 0.56 | D | 0.774 | deleterious | N | 0.483390789 | None | None | N |
L/R | 0.9754 | likely_pathogenic | 0.9763 | pathogenic | -2.466 | Highly Destabilizing | 0.295 | N | 0.765 | deleterious | N | 0.483390789 | None | None | N |
L/S | 0.9424 | likely_pathogenic | 0.9457 | pathogenic | -3.867 | Highly Destabilizing | 0.072 | N | 0.619 | neutral | None | None | None | None | N |
L/T | 0.7832 | likely_pathogenic | 0.7944 | pathogenic | -3.376 | Highly Destabilizing | 0.016 | N | 0.519 | neutral | None | None | None | None | N |
L/V | 0.0498 | likely_benign | 0.06 | benign | -1.725 | Destabilizing | None | N | 0.175 | neutral | N | 0.306330309 | None | None | N |
L/W | 0.9485 | likely_pathogenic | 0.9462 | pathogenic | -2.294 | Highly Destabilizing | 0.864 | D | 0.789 | deleterious | None | None | None | None | N |
L/Y | 0.9405 | likely_pathogenic | 0.9406 | pathogenic | -2.056 | Highly Destabilizing | 0.356 | N | 0.639 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.