Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29207 | 87844;87845;87846 | chr2:178557735;178557734;178557733 | chr2:179422462;179422461;179422460 |
N2AB | 27566 | 82921;82922;82923 | chr2:178557735;178557734;178557733 | chr2:179422462;179422461;179422460 |
N2A | 26639 | 80140;80141;80142 | chr2:178557735;178557734;178557733 | chr2:179422462;179422461;179422460 |
N2B | 20142 | 60649;60650;60651 | chr2:178557735;178557734;178557733 | chr2:179422462;179422461;179422460 |
Novex-1 | 20267 | 61024;61025;61026 | chr2:178557735;178557734;178557733 | chr2:179422462;179422461;179422460 |
Novex-2 | 20334 | 61225;61226;61227 | chr2:178557735;178557734;178557733 | chr2:179422462;179422461;179422460 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1403726987 | -0.815 | 0.805 | N | 0.503 | 0.294 | 0.369495900351 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
E/K | rs1403726987 | -0.815 | 0.805 | N | 0.503 | 0.294 | 0.369495900351 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs1403726987 | -0.815 | 0.805 | N | 0.503 | 0.294 | 0.369495900351 | gnomAD-4.0.0 | 4.95735E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.7807E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3052 | likely_benign | 0.2976 | benign | -0.932 | Destabilizing | 0.892 | D | 0.591 | neutral | N | 0.491830124 | None | None | N |
E/C | 0.936 | likely_pathogenic | 0.9335 | pathogenic | -0.422 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/D | 0.3968 | ambiguous | 0.3988 | ambiguous | -1.131 | Destabilizing | 0.025 | N | 0.283 | neutral | N | 0.481777265 | None | None | N |
E/F | 0.9534 | likely_pathogenic | 0.9485 | pathogenic | -0.531 | Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
E/G | 0.5461 | ambiguous | 0.517 | ambiguous | -1.293 | Destabilizing | 0.892 | D | 0.696 | prob.neutral | N | 0.492590593 | None | None | N |
E/H | 0.8387 | likely_pathogenic | 0.8315 | pathogenic | -0.842 | Destabilizing | 0.997 | D | 0.676 | prob.neutral | None | None | None | None | N |
E/I | 0.5415 | ambiguous | 0.5429 | ambiguous | 0.054 | Stabilizing | 0.987 | D | 0.818 | deleterious | None | None | None | None | N |
E/K | 0.4246 | ambiguous | 0.4046 | ambiguous | -0.537 | Destabilizing | 0.805 | D | 0.503 | neutral | N | 0.478939655 | None | None | N |
E/L | 0.7265 | likely_pathogenic | 0.7091 | pathogenic | 0.054 | Stabilizing | 0.987 | D | 0.797 | deleterious | None | None | None | None | N |
E/M | 0.6373 | likely_pathogenic | 0.6307 | pathogenic | 0.566 | Stabilizing | 0.999 | D | 0.758 | deleterious | None | None | None | None | N |
E/N | 0.5629 | ambiguous | 0.5606 | ambiguous | -0.984 | Destabilizing | 0.95 | D | 0.666 | neutral | None | None | None | None | N |
E/P | 0.8706 | likely_pathogenic | 0.8793 | pathogenic | -0.254 | Destabilizing | 0.987 | D | 0.811 | deleterious | None | None | None | None | N |
E/Q | 0.2362 | likely_benign | 0.2194 | benign | -0.858 | Destabilizing | 0.426 | N | 0.219 | neutral | D | 0.523964766 | None | None | N |
E/R | 0.6233 | likely_pathogenic | 0.6024 | pathogenic | -0.349 | Destabilizing | 0.975 | D | 0.669 | neutral | None | None | None | None | N |
E/S | 0.4452 | ambiguous | 0.4298 | ambiguous | -1.318 | Destabilizing | 0.916 | D | 0.546 | neutral | None | None | None | None | N |
E/T | 0.3547 | ambiguous | 0.3538 | ambiguous | -1.011 | Destabilizing | 0.975 | D | 0.762 | deleterious | None | None | None | None | N |
E/V | 0.3577 | ambiguous | 0.3557 | ambiguous | -0.254 | Destabilizing | 0.983 | D | 0.787 | deleterious | N | 0.483298202 | None | None | N |
E/W | 0.9873 | likely_pathogenic | 0.9866 | pathogenic | -0.304 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/Y | 0.9111 | likely_pathogenic | 0.9014 | pathogenic | -0.269 | Destabilizing | 0.996 | D | 0.797 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.