Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29262 | 88009;88010;88011 | chr2:178557478;178557477;178557476 | chr2:179422205;179422204;179422203 |
N2AB | 27621 | 83086;83087;83088 | chr2:178557478;178557477;178557476 | chr2:179422205;179422204;179422203 |
N2A | 26694 | 80305;80306;80307 | chr2:178557478;178557477;178557476 | chr2:179422205;179422204;179422203 |
N2B | 20197 | 60814;60815;60816 | chr2:178557478;178557477;178557476 | chr2:179422205;179422204;179422203 |
Novex-1 | 20322 | 61189;61190;61191 | chr2:178557478;178557477;178557476 | chr2:179422205;179422204;179422203 |
Novex-2 | 20389 | 61390;61391;61392 | chr2:178557478;178557477;178557476 | chr2:179422205;179422204;179422203 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1053653300 | 0.033 | 0.704 | N | 0.25 | 0.105 | 0.353974658523 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
V/A | rs1053653300 | 0.033 | 0.704 | N | 0.25 | 0.105 | 0.353974658523 | gnomAD-4.0.0 | 2.73669E-06 | None | None | None | None | I | None | 0 | 2.23594E-05 | None | 0 | 5.04236E-05 | None | 0 | 0 | 8.99421E-07 | 0 | 0 |
V/G | rs1053653300 | -0.151 | 0.92 | N | 0.364 | 0.22 | 0.7110473393 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/G | rs1053653300 | -0.151 | 0.92 | N | 0.364 | 0.22 | 0.7110473393 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | I | None | 9.65E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/G | rs1053653300 | -0.151 | 0.92 | N | 0.364 | 0.22 | 0.7110473393 | gnomAD-4.0.0 | 4.95732E-06 | None | None | None | None | I | None | 8.00747E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.09791E-05 | 1.60102E-05 |
V/L | rs1466272644 | 0.054 | 0.906 | N | 0.366 | 0.103 | 0.278143212241 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | I | None | 0 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/L | rs1466272644 | 0.054 | 0.906 | N | 0.366 | 0.103 | 0.278143212241 | gnomAD-3.1.2 | 4.6E-05 | None | None | None | None | I | None | 0 | 4.58235E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/L | rs1466272644 | 0.054 | 0.906 | N | 0.366 | 0.103 | 0.278143212241 | gnomAD-4.0.0 | 5.57685E-06 | None | None | None | None | I | None | 0 | 1.5E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/M | None | None | 0.996 | D | 0.337 | 0.19 | 0.347438807231 | gnomAD-4.0.0 | 6.84174E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99421E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2913 | likely_benign | 0.2863 | benign | -0.328 | Destabilizing | 0.704 | D | 0.25 | neutral | N | 0.447482708 | None | None | I |
V/C | 0.8314 | likely_pathogenic | 0.8402 | pathogenic | -0.803 | Destabilizing | 0.999 | D | 0.303 | neutral | None | None | None | None | I |
V/D | 0.6986 | likely_pathogenic | 0.6367 | pathogenic | -0.324 | Destabilizing | 0.939 | D | 0.388 | neutral | None | None | None | None | I |
V/E | 0.6085 | likely_pathogenic | 0.5463 | ambiguous | -0.443 | Destabilizing | 0.704 | D | 0.321 | neutral | N | 0.472013006 | None | None | I |
V/F | 0.314 | likely_benign | 0.3075 | benign | -0.729 | Destabilizing | 0.997 | D | 0.308 | neutral | None | None | None | None | I |
V/G | 0.3644 | ambiguous | 0.3558 | ambiguous | -0.376 | Destabilizing | 0.92 | D | 0.364 | neutral | N | 0.491505631 | None | None | I |
V/H | 0.7854 | likely_pathogenic | 0.7722 | pathogenic | -0.01 | Destabilizing | 0.991 | D | 0.267 | neutral | None | None | None | None | I |
V/I | 0.095 | likely_benign | 0.0943 | benign | -0.344 | Destabilizing | 0.969 | D | 0.367 | neutral | None | None | None | None | I |
V/K | 0.6461 | likely_pathogenic | 0.5931 | pathogenic | -0.364 | Destabilizing | 0.079 | N | 0.17 | neutral | None | None | None | None | I |
V/L | 0.2744 | likely_benign | 0.2715 | benign | -0.344 | Destabilizing | 0.906 | D | 0.366 | neutral | N | 0.484616944 | None | None | I |
V/M | 0.2425 | likely_benign | 0.2429 | benign | -0.572 | Destabilizing | 0.996 | D | 0.337 | neutral | D | 0.524444769 | None | None | I |
V/N | 0.5112 | ambiguous | 0.4541 | ambiguous | -0.166 | Destabilizing | 0.939 | D | 0.385 | neutral | None | None | None | None | I |
V/P | 0.5442 | ambiguous | 0.5489 | ambiguous | -0.312 | Destabilizing | 0.991 | D | 0.353 | neutral | None | None | None | None | I |
V/Q | 0.551 | ambiguous | 0.522 | ambiguous | -0.378 | Destabilizing | 0.373 | N | 0.229 | neutral | None | None | None | None | I |
V/R | 0.5805 | likely_pathogenic | 0.5471 | ambiguous | 0.067 | Stabilizing | 0.884 | D | 0.381 | neutral | None | None | None | None | I |
V/S | 0.3667 | ambiguous | 0.343 | ambiguous | -0.472 | Destabilizing | 0.373 | N | 0.229 | neutral | None | None | None | None | I |
V/T | 0.3719 | ambiguous | 0.3258 | benign | -0.502 | Destabilizing | 0.759 | D | 0.299 | neutral | None | None | None | None | I |
V/W | 0.9361 | likely_pathogenic | 0.9323 | pathogenic | -0.78 | Destabilizing | 0.999 | D | 0.299 | neutral | None | None | None | None | I |
V/Y | 0.7378 | likely_pathogenic | 0.7291 | pathogenic | -0.509 | Destabilizing | 0.997 | D | 0.311 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.