Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29263 | 88012;88013;88014 | chr2:178557475;178557474;178557473 | chr2:179422202;179422201;179422200 |
N2AB | 27622 | 83089;83090;83091 | chr2:178557475;178557474;178557473 | chr2:179422202;179422201;179422200 |
N2A | 26695 | 80308;80309;80310 | chr2:178557475;178557474;178557473 | chr2:179422202;179422201;179422200 |
N2B | 20198 | 60817;60818;60819 | chr2:178557475;178557474;178557473 | chr2:179422202;179422201;179422200 |
Novex-1 | 20323 | 61192;61193;61194 | chr2:178557475;178557474;178557473 | chr2:179422202;179422201;179422200 |
Novex-2 | 20390 | 61393;61394;61395 | chr2:178557475;178557474;178557473 | chr2:179422202;179422201;179422200 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.984 | N | 0.536 | 0.229 | 0.229264304666 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1046 | likely_benign | 0.1129 | benign | -0.317 | Destabilizing | 0.64 | D | 0.485 | neutral | N | 0.518342729 | None | None | I |
S/C | 0.1113 | likely_benign | 0.1345 | benign | -0.27 | Destabilizing | 0.999 | D | 0.559 | neutral | None | None | None | None | I |
S/D | 0.431 | ambiguous | 0.4541 | ambiguous | 0.074 | Stabilizing | 0.851 | D | 0.46 | neutral | None | None | None | None | I |
S/E | 0.6109 | likely_pathogenic | 0.6246 | pathogenic | -0.03 | Destabilizing | 0.919 | D | 0.472 | neutral | None | None | None | None | I |
S/F | 0.1951 | likely_benign | 0.2255 | benign | -0.964 | Destabilizing | 0.988 | D | 0.683 | prob.neutral | None | None | None | None | I |
S/G | 0.1207 | likely_benign | 0.1368 | benign | -0.405 | Destabilizing | 0.919 | D | 0.45 | neutral | None | None | None | None | I |
S/H | 0.3495 | ambiguous | 0.3619 | ambiguous | -0.929 | Destabilizing | 0.997 | D | 0.531 | neutral | None | None | None | None | I |
S/I | 0.1833 | likely_benign | 0.1921 | benign | -0.217 | Destabilizing | 0.976 | D | 0.681 | prob.neutral | None | None | None | None | I |
S/K | 0.7507 | likely_pathogenic | 0.7705 | pathogenic | -0.456 | Destabilizing | 0.919 | D | 0.475 | neutral | None | None | None | None | I |
S/L | 0.1031 | likely_benign | 0.119 | benign | -0.217 | Destabilizing | 0.811 | D | 0.595 | neutral | N | 0.468603172 | None | None | I |
S/M | 0.1739 | likely_benign | 0.1924 | benign | 0.034 | Stabilizing | 0.999 | D | 0.531 | neutral | None | None | None | None | I |
S/N | 0.1168 | likely_benign | 0.1247 | benign | -0.169 | Destabilizing | 0.132 | N | 0.266 | neutral | None | None | None | None | I |
S/P | 0.8189 | likely_pathogenic | 0.8477 | pathogenic | -0.223 | Destabilizing | 0.984 | D | 0.536 | neutral | N | 0.467819931 | None | None | I |
S/Q | 0.516 | ambiguous | 0.5379 | ambiguous | -0.441 | Destabilizing | 0.988 | D | 0.462 | neutral | None | None | None | None | I |
S/R | 0.6973 | likely_pathogenic | 0.7215 | pathogenic | -0.244 | Destabilizing | 0.988 | D | 0.542 | neutral | None | None | None | None | I |
S/T | 0.0715 | likely_benign | 0.0766 | benign | -0.276 | Destabilizing | 0.103 | N | 0.205 | neutral | N | 0.520324241 | None | None | I |
S/V | 0.1821 | likely_benign | 0.1971 | benign | -0.223 | Destabilizing | 0.952 | D | 0.602 | neutral | None | None | None | None | I |
S/W | 0.3853 | ambiguous | 0.4088 | ambiguous | -0.982 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | I |
S/Y | 0.2133 | likely_benign | 0.2218 | benign | -0.695 | Destabilizing | 0.996 | D | 0.669 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.