Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2928 | 9007;9008;9009 | chr2:178769799;178769798;178769797 | chr2:179634526;179634525;179634524 |
N2AB | 2928 | 9007;9008;9009 | chr2:178769799;178769798;178769797 | chr2:179634526;179634525;179634524 |
N2A | 2928 | 9007;9008;9009 | chr2:178769799;178769798;178769797 | chr2:179634526;179634525;179634524 |
N2B | 2882 | 8869;8870;8871 | chr2:178769799;178769798;178769797 | chr2:179634526;179634525;179634524 |
Novex-1 | 2882 | 8869;8870;8871 | chr2:178769799;178769798;178769797 | chr2:179634526;179634525;179634524 |
Novex-2 | 2882 | 8869;8870;8871 | chr2:178769799;178769798;178769797 | chr2:179634526;179634525;179634524 |
Novex-3 | 2928 | 9007;9008;9009 | chr2:178769799;178769798;178769797 | chr2:179634526;179634525;179634524 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | None | None | 0.961 | N | 0.508 | 0.382 | 0.238705975628 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
K/R | None | None | 0.031 | N | 0.168 | 0.326 | 0.240491677333 | gnomAD-4.0.0 | 1.59046E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77239E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8518 | likely_pathogenic | 0.7931 | pathogenic | -0.7 | Destabilizing | 0.97 | D | 0.541 | neutral | None | None | None | None | N |
K/C | 0.9104 | likely_pathogenic | 0.9017 | pathogenic | -0.682 | Destabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | N |
K/D | 0.9462 | likely_pathogenic | 0.9141 | pathogenic | -0.393 | Destabilizing | 0.996 | D | 0.51 | neutral | None | None | None | None | N |
K/E | 0.6376 | likely_pathogenic | 0.5174 | ambiguous | -0.227 | Destabilizing | 0.961 | D | 0.535 | neutral | N | 0.474710235 | None | None | N |
K/F | 0.9797 | likely_pathogenic | 0.9719 | pathogenic | -0.116 | Destabilizing | 0.999 | D | 0.637 | neutral | None | None | None | None | N |
K/G | 0.8782 | likely_pathogenic | 0.8462 | pathogenic | -1.135 | Destabilizing | 0.985 | D | 0.509 | neutral | None | None | None | None | N |
K/H | 0.5885 | likely_pathogenic | 0.5426 | ambiguous | -1.46 | Destabilizing | 0.999 | D | 0.579 | neutral | None | None | None | None | N |
K/I | 0.8271 | likely_pathogenic | 0.7716 | pathogenic | 0.46 | Stabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | N |
K/L | 0.8198 | likely_pathogenic | 0.7582 | pathogenic | 0.46 | Stabilizing | 0.97 | D | 0.509 | neutral | None | None | None | None | N |
K/M | 0.6641 | likely_pathogenic | 0.5922 | pathogenic | 0.279 | Stabilizing | 1.0 | D | 0.579 | neutral | N | 0.510614972 | None | None | N |
K/N | 0.8571 | likely_pathogenic | 0.7818 | pathogenic | -0.806 | Destabilizing | 0.98 | D | 0.475 | neutral | N | 0.495529398 | None | None | N |
K/P | 0.9917 | likely_pathogenic | 0.9871 | pathogenic | 0.103 | Stabilizing | 0.999 | D | 0.565 | neutral | None | None | None | None | N |
K/Q | 0.2993 | likely_benign | 0.2463 | benign | -0.733 | Destabilizing | 0.961 | D | 0.508 | neutral | N | 0.454907424 | None | None | N |
K/R | 0.1166 | likely_benign | 0.1061 | benign | -0.904 | Destabilizing | 0.031 | N | 0.168 | neutral | N | 0.440303015 | None | None | N |
K/S | 0.8476 | likely_pathogenic | 0.7702 | pathogenic | -1.434 | Destabilizing | 0.985 | D | 0.463 | neutral | None | None | None | None | N |
K/T | 0.5797 | likely_pathogenic | 0.473 | ambiguous | -1.038 | Destabilizing | 0.98 | D | 0.507 | neutral | N | 0.498552984 | None | None | N |
K/V | 0.7925 | likely_pathogenic | 0.7372 | pathogenic | 0.103 | Stabilizing | 0.996 | D | 0.533 | neutral | None | None | None | None | N |
K/W | 0.9586 | likely_pathogenic | 0.9561 | pathogenic | -0.036 | Destabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | N |
K/Y | 0.928 | likely_pathogenic | 0.9183 | pathogenic | 0.243 | Stabilizing | 0.999 | D | 0.623 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.