Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29281 | 88066;88067;88068 | chr2:178557421;178557420;178557419 | chr2:179422148;179422147;179422146 |
N2AB | 27640 | 83143;83144;83145 | chr2:178557421;178557420;178557419 | chr2:179422148;179422147;179422146 |
N2A | 26713 | 80362;80363;80364 | chr2:178557421;178557420;178557419 | chr2:179422148;179422147;179422146 |
N2B | 20216 | 60871;60872;60873 | chr2:178557421;178557420;178557419 | chr2:179422148;179422147;179422146 |
Novex-1 | 20341 | 61246;61247;61248 | chr2:178557421;178557420;178557419 | chr2:179422148;179422147;179422146 |
Novex-2 | 20408 | 61447;61448;61449 | chr2:178557421;178557420;178557419 | chr2:179422148;179422147;179422146 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.822 | N | 0.306 | 0.218 | 0.286081765059 | gnomAD-4.0.0 | 1.36831E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.5194E-05 | None | 0 | 0 | 0 | 1.15934E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1915 | likely_benign | 0.2024 | benign | -0.644 | Destabilizing | 0.559 | D | 0.319 | neutral | None | None | None | None | I |
S/C | 0.2521 | likely_benign | 0.3041 | benign | -0.361 | Destabilizing | 0.997 | D | 0.503 | neutral | D | 0.534012888 | None | None | I |
S/D | 0.952 | likely_pathogenic | 0.9595 | pathogenic | -0.142 | Destabilizing | 0.86 | D | 0.339 | neutral | None | None | None | None | I |
S/E | 0.9731 | likely_pathogenic | 0.9769 | pathogenic | -0.179 | Destabilizing | 0.86 | D | 0.347 | neutral | None | None | None | None | I |
S/F | 0.8981 | likely_pathogenic | 0.9186 | pathogenic | -0.903 | Destabilizing | 0.978 | D | 0.543 | neutral | None | None | None | None | I |
S/G | 0.1996 | likely_benign | 0.2293 | benign | -0.86 | Destabilizing | 0.822 | D | 0.306 | neutral | N | 0.467668574 | None | None | I |
S/H | 0.8675 | likely_pathogenic | 0.8939 | pathogenic | -1.35 | Destabilizing | 0.998 | D | 0.476 | neutral | None | None | None | None | I |
S/I | 0.8931 | likely_pathogenic | 0.9171 | pathogenic | -0.184 | Destabilizing | 0.89 | D | 0.527 | neutral | N | 0.507261353 | None | None | I |
S/K | 0.9865 | likely_pathogenic | 0.9899 | pathogenic | -0.813 | Destabilizing | 0.86 | D | 0.341 | neutral | None | None | None | None | I |
S/L | 0.5018 | ambiguous | 0.5561 | ambiguous | -0.184 | Destabilizing | 0.754 | D | 0.411 | neutral | None | None | None | None | I |
S/M | 0.6792 | likely_pathogenic | 0.7178 | pathogenic | 0.13 | Stabilizing | 0.994 | D | 0.471 | neutral | None | None | None | None | I |
S/N | 0.6 | likely_pathogenic | 0.6395 | pathogenic | -0.618 | Destabilizing | 0.822 | D | 0.364 | neutral | N | 0.491217332 | None | None | I |
S/P | 0.9934 | likely_pathogenic | 0.9959 | pathogenic | -0.304 | Destabilizing | 0.978 | D | 0.456 | neutral | None | None | None | None | I |
S/Q | 0.9183 | likely_pathogenic | 0.9329 | pathogenic | -0.789 | Destabilizing | 0.978 | D | 0.412 | neutral | None | None | None | None | I |
S/R | 0.9711 | likely_pathogenic | 0.979 | pathogenic | -0.641 | Destabilizing | 0.942 | D | 0.441 | neutral | N | 0.498004961 | None | None | I |
S/T | 0.2774 | likely_benign | 0.299 | benign | -0.663 | Destabilizing | 0.014 | N | 0.245 | neutral | N | 0.466138091 | None | None | I |
S/V | 0.798 | likely_pathogenic | 0.8356 | pathogenic | -0.304 | Destabilizing | 0.915 | D | 0.476 | neutral | None | None | None | None | I |
S/W | 0.9443 | likely_pathogenic | 0.9619 | pathogenic | -0.896 | Destabilizing | 0.998 | D | 0.69 | prob.neutral | None | None | None | None | I |
S/Y | 0.8358 | likely_pathogenic | 0.8672 | pathogenic | -0.658 | Destabilizing | 0.993 | D | 0.549 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.