Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29296 | 88111;88112;88113 | chr2:178557376;178557375;178557374 | chr2:179422103;179422102;179422101 |
N2AB | 27655 | 83188;83189;83190 | chr2:178557376;178557375;178557374 | chr2:179422103;179422102;179422101 |
N2A | 26728 | 80407;80408;80409 | chr2:178557376;178557375;178557374 | chr2:179422103;179422102;179422101 |
N2B | 20231 | 60916;60917;60918 | chr2:178557376;178557375;178557374 | chr2:179422103;179422102;179422101 |
Novex-1 | 20356 | 61291;61292;61293 | chr2:178557376;178557375;178557374 | chr2:179422103;179422102;179422101 |
Novex-2 | 20423 | 61492;61493;61494 | chr2:178557376;178557375;178557374 | chr2:179422103;179422102;179422101 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/D | rs1304860683 | None | 1.0 | N | 0.726 | 0.45 | 0.353336612579 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/D | rs1304860683 | None | 1.0 | N | 0.726 | 0.45 | 0.353336612579 | gnomAD-4.0.0 | 3.09821E-06 | None | None | None | None | I | None | 1.33451E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 3.3902E-06 | 0 | 0 |
H/Y | None | None | 0.999 | N | 0.534 | 0.467 | 0.371903410333 | gnomAD-4.0.0 | 6.84157E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99418E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.3314 | likely_benign | 0.3012 | benign | -0.375 | Destabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | I |
H/C | 0.1986 | likely_benign | 0.2084 | benign | 0.286 | Stabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | I |
H/D | 0.3743 | ambiguous | 0.3357 | benign | -0.382 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | N | 0.504530857 | None | None | I |
H/E | 0.449 | ambiguous | 0.3792 | ambiguous | -0.296 | Destabilizing | 0.999 | D | 0.529 | neutral | None | None | None | None | I |
H/F | 0.3647 | ambiguous | 0.3262 | benign | 0.788 | Stabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
H/G | 0.4511 | ambiguous | 0.433 | ambiguous | -0.729 | Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | I |
H/I | 0.3557 | ambiguous | 0.3285 | benign | 0.586 | Stabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | I |
H/K | 0.4457 | ambiguous | 0.3919 | ambiguous | -0.222 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
H/L | 0.1668 | likely_benign | 0.1577 | benign | 0.586 | Stabilizing | 1.0 | D | 0.73 | prob.delet. | N | 0.489446761 | None | None | I |
H/M | 0.4915 | ambiguous | 0.4601 | ambiguous | 0.342 | Stabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | I |
H/N | 0.1143 | likely_benign | 0.1049 | benign | -0.428 | Destabilizing | 0.999 | D | 0.509 | neutral | N | 0.458950496 | None | None | I |
H/P | 0.7551 | likely_pathogenic | 0.766 | pathogenic | 0.288 | Stabilizing | 1.0 | D | 0.751 | deleterious | N | 0.485771737 | None | None | I |
H/Q | 0.2357 | likely_benign | 0.2018 | benign | -0.216 | Destabilizing | 1.0 | D | 0.644 | neutral | N | 0.404636008 | None | None | I |
H/R | 0.1966 | likely_benign | 0.1722 | benign | -0.774 | Destabilizing | 1.0 | D | 0.639 | neutral | N | 0.407270882 | None | None | I |
H/S | 0.2231 | likely_benign | 0.2069 | benign | -0.386 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | I |
H/T | 0.2738 | likely_benign | 0.2476 | benign | -0.187 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
H/V | 0.2885 | likely_benign | 0.2685 | benign | 0.288 | Stabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | I |
H/W | 0.462 | ambiguous | 0.4567 | ambiguous | 1.027 | Stabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
H/Y | 0.1219 | likely_benign | 0.113 | benign | 1.123 | Stabilizing | 0.999 | D | 0.534 | neutral | N | 0.468975488 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.