Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29308 | 88147;88148;88149 | chr2:178557340;178557339;178557338 | chr2:179422067;179422066;179422065 |
N2AB | 27667 | 83224;83225;83226 | chr2:178557340;178557339;178557338 | chr2:179422067;179422066;179422065 |
N2A | 26740 | 80443;80444;80445 | chr2:178557340;178557339;178557338 | chr2:179422067;179422066;179422065 |
N2B | 20243 | 60952;60953;60954 | chr2:178557340;178557339;178557338 | chr2:179422067;179422066;179422065 |
Novex-1 | 20368 | 61327;61328;61329 | chr2:178557340;178557339;178557338 | chr2:179422067;179422066;179422065 |
Novex-2 | 20435 | 61528;61529;61530 | chr2:178557340;178557339;178557338 | chr2:179422067;179422066;179422065 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | D | 0.874 | 0.908 | 0.866217808601 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9936 | likely_pathogenic | 0.995 | pathogenic | -2.911 | Highly Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
Y/C | 0.8421 | likely_pathogenic | 0.858 | pathogenic | -1.554 | Destabilizing | 1.0 | D | 0.874 | deleterious | D | 0.662952815 | None | None | N |
Y/D | 0.9955 | likely_pathogenic | 0.9957 | pathogenic | -3.352 | Highly Destabilizing | 1.0 | D | 0.862 | deleterious | D | 0.678972176 | None | None | N |
Y/E | 0.9983 | likely_pathogenic | 0.9985 | pathogenic | -3.133 | Highly Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
Y/F | 0.3346 | likely_benign | 0.3453 | ambiguous | -0.955 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | D | 0.626311878 | None | None | N |
Y/G | 0.9852 | likely_pathogenic | 0.9877 | pathogenic | -3.337 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
Y/H | 0.9332 | likely_pathogenic | 0.9369 | pathogenic | -1.997 | Destabilizing | 1.0 | D | 0.831 | deleterious | D | 0.678972176 | None | None | N |
Y/I | 0.9807 | likely_pathogenic | 0.9863 | pathogenic | -1.491 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
Y/K | 0.9964 | likely_pathogenic | 0.9972 | pathogenic | -2.084 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
Y/L | 0.9311 | likely_pathogenic | 0.9429 | pathogenic | -1.491 | Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
Y/M | 0.9817 | likely_pathogenic | 0.9845 | pathogenic | -1.208 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
Y/N | 0.9636 | likely_pathogenic | 0.9635 | pathogenic | -2.925 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | D | 0.678770371 | None | None | N |
Y/P | 0.9977 | likely_pathogenic | 0.998 | pathogenic | -1.98 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
Y/Q | 0.9953 | likely_pathogenic | 0.9959 | pathogenic | -2.639 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
Y/R | 0.986 | likely_pathogenic | 0.9877 | pathogenic | -1.939 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
Y/S | 0.9681 | likely_pathogenic | 0.9706 | pathogenic | -3.254 | Highly Destabilizing | 1.0 | D | 0.87 | deleterious | D | 0.678972176 | None | None | N |
Y/T | 0.9898 | likely_pathogenic | 0.9914 | pathogenic | -2.911 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
Y/V | 0.9546 | likely_pathogenic | 0.9663 | pathogenic | -1.98 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
Y/W | 0.7526 | likely_pathogenic | 0.778 | pathogenic | -0.261 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.