Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29309 | 88150;88151;88152 | chr2:178557337;178557336;178557335 | chr2:179422064;179422063;179422062 |
N2AB | 27668 | 83227;83228;83229 | chr2:178557337;178557336;178557335 | chr2:179422064;179422063;179422062 |
N2A | 26741 | 80446;80447;80448 | chr2:178557337;178557336;178557335 | chr2:179422064;179422063;179422062 |
N2B | 20244 | 60955;60956;60957 | chr2:178557337;178557336;178557335 | chr2:179422064;179422063;179422062 |
Novex-1 | 20369 | 61330;61331;61332 | chr2:178557337;178557336;178557335 | chr2:179422064;179422063;179422062 |
Novex-2 | 20436 | 61531;61532;61533 | chr2:178557337;178557336;178557335 | chr2:179422064;179422063;179422062 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1208405934 | None | 1.0 | N | 0.732 | 0.582 | 0.550005317886 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.92456E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs1208405934 | None | 1.0 | N | 0.732 | 0.582 | 0.550005317886 | gnomAD-4.0.0 | 6.5703E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.92456E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.6116 | likely_pathogenic | 0.6044 | pathogenic | -1.506 | Destabilizing | 0.999 | D | 0.659 | neutral | N | 0.499085053 | None | None | I |
E/C | 0.9569 | likely_pathogenic | 0.9521 | pathogenic | -0.776 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
E/D | 0.7474 | likely_pathogenic | 0.8311 | pathogenic | -1.777 | Destabilizing | 0.999 | D | 0.511 | neutral | N | 0.507580976 | None | None | I |
E/F | 0.9819 | likely_pathogenic | 0.9837 | pathogenic | -1.126 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
E/G | 0.8204 | likely_pathogenic | 0.8244 | pathogenic | -1.928 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | N | 0.516228256 | None | None | I |
E/H | 0.9361 | likely_pathogenic | 0.9409 | pathogenic | -1.119 | Destabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | I |
E/I | 0.831 | likely_pathogenic | 0.887 | pathogenic | -0.29 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | I |
E/K | 0.8535 | likely_pathogenic | 0.8551 | pathogenic | -1.542 | Destabilizing | 0.999 | D | 0.591 | neutral | N | 0.471648727 | None | None | I |
E/L | 0.9115 | likely_pathogenic | 0.9378 | pathogenic | -0.29 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
E/M | 0.8569 | likely_pathogenic | 0.8698 | pathogenic | 0.484 | Stabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
E/N | 0.8873 | likely_pathogenic | 0.9024 | pathogenic | -1.862 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | I |
E/P | 0.999 | likely_pathogenic | 0.9993 | pathogenic | -0.681 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | I |
E/Q | 0.3765 | ambiguous | 0.3401 | ambiguous | -1.516 | Destabilizing | 1.0 | D | 0.651 | neutral | N | 0.501685339 | None | None | I |
E/R | 0.8973 | likely_pathogenic | 0.8917 | pathogenic | -1.404 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | I |
E/S | 0.6582 | likely_pathogenic | 0.6457 | pathogenic | -2.506 | Highly Destabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | I |
E/T | 0.7185 | likely_pathogenic | 0.7496 | pathogenic | -2.101 | Highly Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | I |
E/V | 0.6898 | likely_pathogenic | 0.7639 | pathogenic | -0.681 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | N | 0.476839741 | None | None | I |
E/W | 0.9962 | likely_pathogenic | 0.9966 | pathogenic | -1.209 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | I |
E/Y | 0.9714 | likely_pathogenic | 0.9728 | pathogenic | -0.952 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.