Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29313 | 88162;88163;88164 | chr2:178557325;178557324;178557323 | chr2:179422052;179422051;179422050 |
N2AB | 27672 | 83239;83240;83241 | chr2:178557325;178557324;178557323 | chr2:179422052;179422051;179422050 |
N2A | 26745 | 80458;80459;80460 | chr2:178557325;178557324;178557323 | chr2:179422052;179422051;179422050 |
N2B | 20248 | 60967;60968;60969 | chr2:178557325;178557324;178557323 | chr2:179422052;179422051;179422050 |
Novex-1 | 20373 | 61342;61343;61344 | chr2:178557325;178557324;178557323 | chr2:179422052;179422051;179422050 |
Novex-2 | 20440 | 61543;61544;61545 | chr2:178557325;178557324;178557323 | chr2:179422052;179422051;179422050 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/F | None | None | 0.211 | N | 0.653 | 0.082 | 0.289098819767 | gnomAD-4.0.0 | 6.84166E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15931E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.3037 | likely_benign | 0.2991 | benign | -3.318 | Highly Destabilizing | 0.001 | N | 0.479 | neutral | None | None | None | None | I |
Y/C | 0.0824 | likely_benign | 0.0817 | benign | -1.615 | Destabilizing | 0.001 | N | 0.529 | neutral | N | 0.488505398 | None | None | I |
Y/D | 0.6415 | likely_pathogenic | 0.6411 | pathogenic | -3.136 | Highly Destabilizing | 0.317 | N | 0.661 | neutral | N | 0.500082103 | None | None | I |
Y/E | 0.7961 | likely_pathogenic | 0.7873 | pathogenic | -3.018 | Highly Destabilizing | 0.081 | N | 0.609 | neutral | None | None | None | None | I |
Y/F | 0.0616 | likely_benign | 0.0647 | benign | -1.401 | Destabilizing | 0.211 | N | 0.653 | neutral | N | 0.471015716 | None | None | I |
Y/G | 0.4154 | ambiguous | 0.4215 | ambiguous | -3.649 | Highly Destabilizing | 0.081 | N | 0.633 | neutral | None | None | None | None | I |
Y/H | 0.1919 | likely_benign | 0.1876 | benign | -2.031 | Highly Destabilizing | 0.484 | N | 0.651 | neutral | N | 0.481977848 | None | None | I |
Y/I | 0.3748 | ambiguous | 0.3667 | ambiguous | -2.231 | Highly Destabilizing | 0.149 | N | 0.605 | neutral | None | None | None | None | I |
Y/K | 0.7134 | likely_pathogenic | 0.7053 | pathogenic | -2.077 | Highly Destabilizing | 0.081 | N | 0.63 | neutral | None | None | None | None | I |
Y/L | 0.3271 | likely_benign | 0.3154 | benign | -2.231 | Highly Destabilizing | 0.035 | N | 0.62 | neutral | None | None | None | None | I |
Y/M | 0.3376 | likely_benign | 0.339 | benign | -1.707 | Destabilizing | 0.791 | D | 0.614 | neutral | None | None | None | None | I |
Y/N | 0.2487 | likely_benign | 0.2382 | benign | -2.508 | Highly Destabilizing | 0.317 | N | 0.646 | neutral | N | 0.500082103 | None | None | I |
Y/P | 0.9853 | likely_pathogenic | 0.9851 | pathogenic | -2.602 | Highly Destabilizing | 0.555 | D | 0.659 | neutral | None | None | None | None | I |
Y/Q | 0.4742 | ambiguous | 0.4762 | ambiguous | -2.468 | Highly Destabilizing | 0.38 | N | 0.635 | neutral | None | None | None | None | I |
Y/R | 0.507 | ambiguous | 0.4968 | ambiguous | -1.475 | Destabilizing | 0.001 | N | 0.534 | neutral | None | None | None | None | I |
Y/S | 0.1131 | likely_benign | 0.1132 | benign | -2.876 | Highly Destabilizing | 0.062 | N | 0.637 | neutral | N | 0.443194396 | None | None | I |
Y/T | 0.2599 | likely_benign | 0.2557 | benign | -2.672 | Highly Destabilizing | 0.149 | N | 0.629 | neutral | None | None | None | None | I |
Y/V | 0.3018 | likely_benign | 0.2937 | benign | -2.602 | Highly Destabilizing | 0.081 | N | 0.633 | neutral | None | None | None | None | I |
Y/W | 0.426 | ambiguous | 0.4129 | ambiguous | -0.864 | Destabilizing | 0.935 | D | 0.649 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.