Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29330 | 88213;88214;88215 | chr2:178557274;178557273;178557272 | chr2:179422001;179422000;179421999 |
N2AB | 27689 | 83290;83291;83292 | chr2:178557274;178557273;178557272 | chr2:179422001;179422000;179421999 |
N2A | 26762 | 80509;80510;80511 | chr2:178557274;178557273;178557272 | chr2:179422001;179422000;179421999 |
N2B | 20265 | 61018;61019;61020 | chr2:178557274;178557273;178557272 | chr2:179422001;179422000;179421999 |
Novex-1 | 20390 | 61393;61394;61395 | chr2:178557274;178557273;178557272 | chr2:179422001;179422000;179421999 |
Novex-2 | 20457 | 61594;61595;61596 | chr2:178557274;178557273;178557272 | chr2:179422001;179422000;179421999 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1701877919 | None | 0.997 | N | 0.676 | 0.333 | 0.60416271137 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3797 | ambiguous | 0.3338 | benign | -1.617 | Destabilizing | 0.997 | D | 0.676 | prob.neutral | N | 0.480733173 | None | None | N |
V/C | 0.7513 | likely_pathogenic | 0.7421 | pathogenic | -1.049 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
V/D | 0.9219 | likely_pathogenic | 0.9115 | pathogenic | -1.574 | Destabilizing | 0.999 | D | 0.851 | deleterious | N | 0.508245177 | None | None | N |
V/E | 0.7646 | likely_pathogenic | 0.715 | pathogenic | -1.42 | Destabilizing | 0.999 | D | 0.887 | deleterious | None | None | None | None | N |
V/F | 0.3225 | likely_benign | 0.2939 | benign | -0.972 | Destabilizing | 0.999 | D | 0.865 | deleterious | N | 0.480986662 | None | None | N |
V/G | 0.6205 | likely_pathogenic | 0.5878 | pathogenic | -2.061 | Highly Destabilizing | 0.999 | D | 0.857 | deleterious | N | 0.508245177 | None | None | N |
V/H | 0.8582 | likely_pathogenic | 0.8397 | pathogenic | -1.489 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
V/I | 0.0899 | likely_benign | 0.0914 | benign | -0.424 | Destabilizing | 0.994 | D | 0.623 | neutral | N | 0.47670675 | None | None | N |
V/K | 0.7716 | likely_pathogenic | 0.7286 | pathogenic | -1.324 | Destabilizing | 0.999 | D | 0.889 | deleterious | None | None | None | None | N |
V/L | 0.3146 | likely_benign | 0.3141 | benign | -0.424 | Destabilizing | 0.994 | D | 0.64 | neutral | N | 0.466717068 | None | None | N |
V/M | 0.2107 | likely_benign | 0.2001 | benign | -0.404 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
V/N | 0.7666 | likely_pathogenic | 0.7504 | pathogenic | -1.489 | Destabilizing | 0.999 | D | 0.834 | deleterious | None | None | None | None | N |
V/P | 0.981 | likely_pathogenic | 0.9843 | pathogenic | -0.791 | Destabilizing | 0.999 | D | 0.881 | deleterious | None | None | None | None | N |
V/Q | 0.6393 | likely_pathogenic | 0.5966 | pathogenic | -1.413 | Destabilizing | 0.999 | D | 0.861 | deleterious | None | None | None | None | N |
V/R | 0.7008 | likely_pathogenic | 0.6489 | pathogenic | -1.065 | Destabilizing | 0.999 | D | 0.845 | deleterious | None | None | None | None | N |
V/S | 0.5545 | ambiguous | 0.514 | ambiguous | -2.099 | Highly Destabilizing | 0.999 | D | 0.879 | deleterious | None | None | None | None | N |
V/T | 0.3425 | ambiguous | 0.3028 | benign | -1.801 | Destabilizing | 0.998 | D | 0.633 | neutral | None | None | None | None | N |
V/W | 0.9467 | likely_pathogenic | 0.9424 | pathogenic | -1.307 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
V/Y | 0.786 | likely_pathogenic | 0.7681 | pathogenic | -0.925 | Destabilizing | 0.999 | D | 0.851 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.