Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29360 | 88303;88304;88305 | chr2:178557076;178557075;178557074 | chr2:179421803;179421802;179421801 |
N2AB | 27719 | 83380;83381;83382 | chr2:178557076;178557075;178557074 | chr2:179421803;179421802;179421801 |
N2A | 26792 | 80599;80600;80601 | chr2:178557076;178557075;178557074 | chr2:179421803;179421802;179421801 |
N2B | 20295 | 61108;61109;61110 | chr2:178557076;178557075;178557074 | chr2:179421803;179421802;179421801 |
Novex-1 | 20420 | 61483;61484;61485 | chr2:178557076;178557075;178557074 | chr2:179421803;179421802;179421801 |
Novex-2 | 20487 | 61684;61685;61686 | chr2:178557076;178557075;178557074 | chr2:179421803;179421802;179421801 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | None | None | 0.625 | N | 0.347 | 0.217 | 0.197625483188 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4588 | ambiguous | 0.4274 | ambiguous | -0.791 | Destabilizing | 0.998 | D | 0.357 | neutral | None | None | None | None | N |
A/D | 0.2697 | likely_benign | 0.2163 | benign | -0.779 | Destabilizing | 0.669 | D | 0.459 | neutral | N | 0.454411467 | None | None | N |
A/E | 0.2318 | likely_benign | 0.1955 | benign | -0.922 | Destabilizing | 0.842 | D | 0.389 | neutral | None | None | None | None | N |
A/F | 0.3445 | ambiguous | 0.3048 | benign | -0.93 | Destabilizing | 0.037 | N | 0.262 | neutral | None | None | None | None | N |
A/G | 0.1507 | likely_benign | 0.1424 | benign | -0.475 | Destabilizing | 0.625 | D | 0.347 | neutral | N | 0.424648708 | None | None | N |
A/H | 0.4514 | ambiguous | 0.4226 | ambiguous | -0.45 | Destabilizing | 0.974 | D | 0.454 | neutral | None | None | None | None | N |
A/I | 0.174 | likely_benign | 0.1588 | benign | -0.414 | Destabilizing | 0.904 | D | 0.387 | neutral | None | None | None | None | N |
A/K | 0.4286 | ambiguous | 0.3738 | ambiguous | -0.87 | Destabilizing | 0.842 | D | 0.398 | neutral | None | None | None | None | N |
A/L | 0.1342 | likely_benign | 0.1308 | benign | -0.414 | Destabilizing | 0.728 | D | 0.385 | neutral | None | None | None | None | N |
A/M | 0.2041 | likely_benign | 0.1945 | benign | -0.487 | Destabilizing | 0.993 | D | 0.377 | neutral | None | None | None | None | N |
A/N | 0.1955 | likely_benign | 0.1872 | benign | -0.521 | Destabilizing | 0.067 | N | 0.23 | neutral | None | None | None | None | N |
A/P | 0.1598 | likely_benign | 0.1545 | benign | -0.377 | Destabilizing | 0.966 | D | 0.41 | neutral | N | 0.472285152 | None | None | N |
A/Q | 0.2924 | likely_benign | 0.2752 | benign | -0.811 | Destabilizing | 0.974 | D | 0.404 | neutral | None | None | None | None | N |
A/R | 0.4084 | ambiguous | 0.3522 | ambiguous | -0.328 | Destabilizing | 0.974 | D | 0.385 | neutral | None | None | None | None | N |
A/S | 0.0888 | likely_benign | 0.089 | benign | -0.692 | Destabilizing | 0.136 | N | 0.145 | neutral | N | 0.451813879 | None | None | N |
A/T | 0.0834 | likely_benign | 0.0832 | benign | -0.762 | Destabilizing | 0.669 | D | 0.344 | neutral | N | 0.417701306 | None | None | N |
A/V | 0.1037 | likely_benign | 0.0947 | benign | -0.377 | Destabilizing | 0.801 | D | 0.325 | neutral | N | 0.436865857 | None | None | N |
A/W | 0.7429 | likely_pathogenic | 0.6859 | pathogenic | -1.077 | Destabilizing | 0.998 | D | 0.507 | neutral | None | None | None | None | N |
A/Y | 0.451 | ambiguous | 0.4122 | ambiguous | -0.75 | Destabilizing | 0.904 | D | 0.491 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.