Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29361 | 88306;88307;88308 | chr2:178557073;178557072;178557071 | chr2:179421800;179421799;179421798 |
N2AB | 27720 | 83383;83384;83385 | chr2:178557073;178557072;178557071 | chr2:179421800;179421799;179421798 |
N2A | 26793 | 80602;80603;80604 | chr2:178557073;178557072;178557071 | chr2:179421800;179421799;179421798 |
N2B | 20296 | 61111;61112;61113 | chr2:178557073;178557072;178557071 | chr2:179421800;179421799;179421798 |
Novex-1 | 20421 | 61486;61487;61488 | chr2:178557073;178557072;178557071 | chr2:179421800;179421799;179421798 |
Novex-2 | 20488 | 61687;61688;61689 | chr2:178557073;178557072;178557071 | chr2:179421800;179421799;179421798 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs746746013 | None | 0.625 | N | 0.374 | 0.184 | 0.0297737177859 | gnomAD-4.0.0 | 6.84284E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99475E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.7251 | likely_pathogenic | 0.6236 | pathogenic | -1.011 | Destabilizing | 0.842 | D | 0.401 | neutral | None | None | None | None | I |
F/C | 0.5767 | likely_pathogenic | 0.4422 | ambiguous | -0.201 | Destabilizing | 0.997 | D | 0.369 | neutral | N | 0.455639208 | None | None | I |
F/D | 0.8569 | likely_pathogenic | 0.8073 | pathogenic | 0.713 | Stabilizing | 0.974 | D | 0.385 | neutral | None | None | None | None | I |
F/E | 0.9134 | likely_pathogenic | 0.8773 | pathogenic | 0.68 | Stabilizing | 0.949 | D | 0.386 | neutral | None | None | None | None | I |
F/G | 0.8348 | likely_pathogenic | 0.7564 | pathogenic | -1.21 | Destabilizing | 0.915 | D | 0.434 | neutral | None | None | None | None | I |
F/H | 0.6404 | likely_pathogenic | 0.5503 | ambiguous | 0.154 | Stabilizing | 0.949 | D | 0.355 | neutral | None | None | None | None | I |
F/I | 0.5948 | likely_pathogenic | 0.4804 | ambiguous | -0.508 | Destabilizing | 0.891 | D | 0.384 | neutral | N | 0.466865398 | None | None | I |
F/K | 0.9172 | likely_pathogenic | 0.8858 | pathogenic | -0.003 | Destabilizing | 0.949 | D | 0.383 | neutral | None | None | None | None | I |
F/L | 0.945 | likely_pathogenic | 0.9072 | pathogenic | -0.508 | Destabilizing | 0.625 | D | 0.374 | neutral | N | 0.4718285 | None | None | I |
F/M | 0.7255 | likely_pathogenic | 0.6392 | pathogenic | -0.269 | Destabilizing | 0.991 | D | 0.345 | neutral | None | None | None | None | I |
F/N | 0.6523 | likely_pathogenic | 0.559 | ambiguous | 0.127 | Stabilizing | 0.991 | D | 0.401 | neutral | None | None | None | None | I |
F/P | 0.9947 | likely_pathogenic | 0.9902 | pathogenic | -0.656 | Destabilizing | 0.016 | N | 0.293 | neutral | None | None | None | None | I |
F/Q | 0.8623 | likely_pathogenic | 0.8043 | pathogenic | 0.006 | Stabilizing | 0.991 | D | 0.399 | neutral | None | None | None | None | I |
F/R | 0.8379 | likely_pathogenic | 0.7801 | pathogenic | 0.524 | Stabilizing | 0.974 | D | 0.402 | neutral | None | None | None | None | I |
F/S | 0.5396 | ambiguous | 0.4222 | ambiguous | -0.585 | Destabilizing | 0.801 | D | 0.417 | neutral | N | 0.390327412 | None | None | I |
F/T | 0.6724 | likely_pathogenic | 0.5776 | pathogenic | -0.525 | Destabilizing | 0.915 | D | 0.401 | neutral | None | None | None | None | I |
F/V | 0.5167 | ambiguous | 0.4085 | ambiguous | -0.656 | Destabilizing | 0.801 | D | 0.423 | neutral | N | 0.474330088 | None | None | I |
F/W | 0.536 | ambiguous | 0.4547 | ambiguous | -0.382 | Destabilizing | 0.974 | D | 0.361 | neutral | None | None | None | None | I |
F/Y | 0.1466 | likely_benign | 0.1142 | benign | -0.31 | Destabilizing | 0.007 | N | 0.091 | neutral | N | 0.350329016 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.