Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29368 | 88327;88328;88329 | chr2:178557052;178557051;178557050 | chr2:179421779;179421778;179421777 |
N2AB | 27727 | 83404;83405;83406 | chr2:178557052;178557051;178557050 | chr2:179421779;179421778;179421777 |
N2A | 26800 | 80623;80624;80625 | chr2:178557052;178557051;178557050 | chr2:179421779;179421778;179421777 |
N2B | 20303 | 61132;61133;61134 | chr2:178557052;178557051;178557050 | chr2:179421779;179421778;179421777 |
Novex-1 | 20428 | 61507;61508;61509 | chr2:178557052;178557051;178557050 | chr2:179421779;179421778;179421777 |
Novex-2 | 20495 | 61708;61709;61710 | chr2:178557052;178557051;178557050 | chr2:179421779;179421778;179421777 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs757375731 | -0.25 | 0.997 | N | 0.788 | 0.403 | 0.39724302092 | gnomAD-2.1.1 | 2.01E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.63506E-04 | None | 0 | 0 | 0 |
T/I | rs757375731 | -0.25 | 0.997 | N | 0.788 | 0.403 | 0.39724302092 | gnomAD-4.0.0 | 7.52672E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.27545E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2279 | likely_benign | 0.1638 | benign | -0.798 | Destabilizing | 0.977 | D | 0.464 | neutral | N | 0.509226817 | None | None | I |
T/C | 0.6917 | likely_pathogenic | 0.6045 | pathogenic | -0.46 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
T/D | 0.8529 | likely_pathogenic | 0.7625 | pathogenic | -0.561 | Destabilizing | 0.995 | D | 0.663 | neutral | None | None | None | None | I |
T/E | 0.7678 | likely_pathogenic | 0.6463 | pathogenic | -0.576 | Destabilizing | 0.966 | D | 0.617 | neutral | None | None | None | None | I |
T/F | 0.6695 | likely_pathogenic | 0.5234 | ambiguous | -0.985 | Destabilizing | 0.999 | D | 0.832 | deleterious | None | None | None | None | I |
T/G | 0.6383 | likely_pathogenic | 0.5425 | ambiguous | -1.034 | Destabilizing | 0.995 | D | 0.689 | prob.neutral | None | None | None | None | I |
T/H | 0.6875 | likely_pathogenic | 0.5681 | pathogenic | -1.379 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | I |
T/I | 0.275 | likely_benign | 0.215 | benign | -0.263 | Destabilizing | 0.997 | D | 0.788 | deleterious | N | 0.517521584 | None | None | I |
T/K | 0.6126 | likely_pathogenic | 0.4831 | ambiguous | -0.758 | Destabilizing | 0.235 | N | 0.318 | neutral | N | 0.49127392 | None | None | I |
T/L | 0.2228 | likely_benign | 0.1781 | benign | -0.263 | Destabilizing | 0.983 | D | 0.551 | neutral | None | None | None | None | I |
T/M | 0.1581 | likely_benign | 0.1262 | benign | 0.206 | Stabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | I |
T/N | 0.3908 | ambiguous | 0.2991 | benign | -0.709 | Destabilizing | 0.995 | D | 0.661 | neutral | None | None | None | None | I |
T/P | 0.6877 | likely_pathogenic | 0.608 | pathogenic | -0.41 | Destabilizing | 0.997 | D | 0.787 | deleterious | D | 0.535853448 | None | None | I |
T/Q | 0.5831 | likely_pathogenic | 0.4752 | ambiguous | -0.959 | Destabilizing | 0.995 | D | 0.781 | deleterious | None | None | None | None | I |
T/R | 0.5369 | ambiguous | 0.3896 | ambiguous | -0.455 | Destabilizing | 0.987 | D | 0.661 | neutral | N | 0.492034388 | None | None | I |
T/S | 0.2687 | likely_benign | 0.2034 | benign | -0.941 | Destabilizing | 0.977 | D | 0.427 | neutral | D | 0.525370276 | None | None | I |
T/V | 0.2157 | likely_benign | 0.1686 | benign | -0.41 | Destabilizing | 0.991 | D | 0.503 | neutral | None | None | None | None | I |
T/W | 0.9072 | likely_pathogenic | 0.8522 | pathogenic | -0.92 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
T/Y | 0.7424 | likely_pathogenic | 0.6262 | pathogenic | -0.679 | Destabilizing | 0.999 | D | 0.83 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.